Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HM439362.1 nt Plant binary vector pXS2pat-Strep, ... 5267 bp Plant binary vector pXS2pat-Strep QL-ELE-00-007 180 bp View
NRN_GM716112 nrnl1 Sequence 140 from Patent WO20081005... 8979 bp unidentified QL-ELE-00-007 180 bp View
JA279480.1 emblrelpat Sequence 15 from Patent WO2011008510. 17273 bp synthetic construct QL-ELE-00-007 180 bp View
NRN_HB436926 nrnl1 Sequence 14 from Patent WO2009076426. 13317 bp unidentified QL-ELE-00-007 180 bp View
HM047294.1 nt Binary vector pBI121-ELEMENTS, comp... 16746 bp Binary vector pBI121-ELEMENTS QL-ELE-00-007 180 bp View
NRN_HB432197 nrnl1 Sequence 4818 from Patent WO2009073069. 8504 bp unidentified QL-ELE-00-007 180 bp View
NRN_GX641316 nrnl1 Sequence 31 from patent US 7812223.... 18491 bp unidentified QL-ELE-00-007 180 bp View
JA279571.1 emblrelpat Sequence 106 from Patent WO2011008510. 8392 bp synthetic construct QL-ELE-00-007 180 bp View
HM352557.1 nt Wheat transformation vector pghp8.1... 5147 bp Wheat transformation vector pghp8.1 QL-ELE-00-007 180 bp View
NRN_HA641817 nrnl1 Sequence 31 from Patent WO2009056155. 12667 bp unidentified QL-ELE-00-007 180 bp View
JB036134.1 emblrelpat Sequence 118 from Patent EP2527455. 11135 bp synthetic construct QL-ELE-00-007 180 bp View
HM352558.1 nt Wheat transformation vector pGhp-om... 5787 bp Wheat transformation vector pGhp-omega/alpha/beta QL-ELE-00-007 180 bp View
NRN_HA641803 nrnl1 Sequence 17 from Patent WO2009056155. 12435 bp unidentified QL-ELE-00-007 180 bp View
AB752375.1 nt Gateway binary vector pGWB480omega ... 12333 bp Gateway binary vector pGWB480omega QL-ELE-00-007 180 bp View
NRN_HB432195 nrnl1 Sequence 4816 from Patent WO2009073069. 12554 bp unidentified QL-ELE-00-007 180 bp View
NRN_HI578412 nrnl1 Sequence 28 from Patent WO2010114989. 20921 bp unidentified QL-ELE-00-007 180 bp View
AB752375.1 nt Gateway binary vector pGWB480omega ... 12333 bp Gateway binary vector pGWB480omega QL-ELE-00-007 180 bp View
NRN_HI578394 nrnl1 Sequence 10 from Patent WO2010114989. 11299 bp unidentified QL-ELE-00-007 180 bp View
EU363766.1 nt Zea mays Bt10 transgenic insert. 1354 bp Zea mays QL-ELE-00-007 180 bp View
NRN_HH760161 nrnl1 Sequence 581 from Patent EP2221381. 11180 bp unidentified QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.