Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN593323.1 nt Binary vector pGPro3, complete sequ... 9133 bp Binary vector pGPro3 QL-ELE-00-007 180 bp View
CS140753.1 emblrelpat Sequence 20 from Patent WO2005071090. 9573 bp synthetic construct QL-ELE-00-007 180 bp View
FJ467933.1 nt Carica papaya transgenic cultivar R... 15595 bp Carica papaya QL-ELE-00-007 180 bp View
FJ467933.1 nt Carica papaya transgenic cultivar R... 15595 bp Carica papaya QL-ELE-00-007 180 bp View
JN593324.1 nt Binary vector pGPro4, complete sequ... 7698 bp Binary vector pGPro4 QL-ELE-00-007 180 bp View
FJ490192.1 nt Synthetic construct replicase gene,... 2317 bp synthetic construct QL-ELE-00-007 180 bp View
KR857722.1 nt BiFC expression vector kanII-StriRV... 13102 bp BiFC expression vector kanII-StriRV QL-ELE-00-007 180 bp View
FJ410918.1 nt Binary vector pWY107, complete sequ... 5818 bp Binary vector pWY107 QL-ELE-00-007 180 bp View
JN593325.1 nt Binary vector pGPro4-35S, complete ... 8419 bp Binary vector pGPro4-35S QL-ELE-00-007 180 bp View
FJ410919.1 nt Binary vector pWY109, complete sequ... 5575 bp Binary vector pWY109 QL-ELE-00-007 180 bp View
FJ530950.1 nt Cloning vector pNIGEL19, complete s... 7570 bp Cloning vector pNIGEL19 QL-ELE-00-007 180 bp View
OM228707.1 nt Binary Vector pYL-PV4MF6, complete ... 13457 bp Binary Vector pYL-PV4MF6 QL-ELE-00-007 180 bp View
FJ493465.1 nt Cloning vector pNIGEL07, complete s... 8157 bp Cloning vector pNIGEL07 QL-ELE-00-007 180 bp View
JN593326.1 nt Binary vector pGPro5, complete sequ... 8663 bp Binary vector pGPro5 QL-ELE-00-007 180 bp View
FJ493466.1 nt Cloning vector pNIGEL17, complete s... 7842 bp Cloning vector pNIGEL17 QL-ELE-00-007 180 bp View
CS249198.1 emblrelpat Sequence 70 from Patent WO2005121347. 9616 bp synthetic construct QL-ELE-00-007 180 bp View
FJ493467.1 nt Cloning vector pNIGEL18, complete s... 7581 bp Cloning vector pNIGEL18 QL-ELE-00-007 180 bp View
NRN_CQ889073 nrnl1 Sequence 5 from Patent WO2004085656... 5653 bp unidentified QL-ELE-00-007 180 bp View
JN593327.1 nt Binary vector pGPro8, complete sequ... 8588 bp Binary vector pGPro8 QL-ELE-00-007 180 bp View
NRN_CS592901 nrnl1 Sequence 129 from Patent WO2007039454. 11855 bp unidentified QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.