Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KP150432.1 nt Binary vector pYBA-1354, complete s... 6366 bp Binary vector pYBA-1354 QL-ELE-00-007 180 bp View
AB364192.1 nt Gateway binary vector R4pGWB543 DNA... 11873 bp Gateway binary vector R4pGWB543 QL-ELE-00-007 180 bp View
OM228703.1 nt Binary Vector pYL-PV4MF2, complete ... 12669 bp Binary Vector pYL-PV4MF2 QL-ELE-00-007 180 bp View
MT024581.1 nt Binary vector pRATIO1131, complete ... 13200 bp Binary vector pRATIO1131 QL-ELE-00-007 180 bp View
AB364193.1 nt Gateway binary vector R4pGWB550 DNA... 11873 bp Gateway binary vector R4pGWB550 QL-ELE-00-007 180 bp View
AB364193.1 nt Gateway binary vector R4pGWB550 DNA... 11873 bp Gateway binary vector R4pGWB550 QL-ELE-00-007 180 bp View
MT024581.1 nt Binary vector pRATIO1131, complete ... 13200 bp Binary vector pRATIO1131 QL-ELE-00-007 180 bp View
CQ768143.1 emblrelpat Sequence 10 from Patent WO2004007731. 7932 bp synthetic construct QL-ELE-00-007 180 bp View
AB364194.1 nt Gateway binary vector R4pGWB553 DNA... 11834 bp Gateway binary vector R4pGWB553 QL-ELE-00-007 180 bp View
AB364194.1 nt Gateway binary vector R4pGWB553 DNA... 11834 bp Gateway binary vector R4pGWB553 QL-ELE-00-007 180 bp View
CQ769032.1 emblrelpat Sequence 10 from Patent WO2004007733. 7932 bp synthetic construct QL-ELE-00-007 180 bp View
EU161567.1 nt Binary vector pIPKb001, complete se... 12480 bp Binary vector pIPKb001 QL-ELE-00-007 180 bp View
MT024582.1 nt Binary vector pRATIO1112, complete ... 13215 bp Binary vector pRATIO1112 QL-ELE-00-007 180 bp View
EU161568.1 nt Binary vector pIPKb002, complete se... 13992 bp Binary vector pIPKb002 QL-ELE-00-007 180 bp View
MT024582.1 nt Binary vector pRATIO1112, complete ... 13215 bp Binary vector pRATIO1112 QL-ELE-00-007 180 bp View
EU161569.1 nt Binary vector pIPKb003, complete se... 13863 bp Binary vector pIPKb003 QL-ELE-00-007 180 bp View
CQ774407.1 emblrelpat Sequence 12 from Patent WO2004013169. 8514 bp synthetic construct QL-ELE-00-007 180 bp View
EU161570.1 nt Binary vector pIPKb004, complete se... 13338 bp Binary vector pIPKb004 QL-ELE-00-007 180 bp View
CQ774408.1 emblrelpat Sequence 13 from Patent WO2004013169. 8692 bp synthetic construct QL-ELE-00-007 180 bp View
MT024583.1 nt Binary vector pRATIO1212, complete ... 13281 bp Binary vector pRATIO1212 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.