Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725453.1 nt Gateway expression vector pAGRIKOLA... 9517 bp Gateway expression vector pAGRIKOLA-CATMA4a33440 QL-ELE-00-007 180 bp View
HI410677.1 emblrelpat Sequence 8802 from Patent EP2074227. 4227 bp synthetic construct QL-ELE-00-007 180 bp View
LT725454.1 nt Gateway expression vector pAGRIKOLA... 9567 bp Gateway expression vector pAGRIKOLA-CATMA4a33490 QL-ELE-00-007 180 bp View
JC518254.1 emblrelpat Sequence 161 from Patent EP2733152. 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725455.1 nt Gateway expression vector pAGRIKOLA... 9453 bp Gateway expression vector pAGRIKOLA-CATMA4a33585 QL-ELE-00-007 180 bp View
MK896899.1 nt Plant binary expression vector pNC-... 11185 bp Plant binary expression vector pNC-Cam1304-SubC QL-ELE-00-007 180 bp View
HV245496.1 emblrelpat JP 2009529863-A/6: D-AMINOACID SELE... 10096 bp synthetic construct QL-ELE-00-007 180 bp View
LT725457.1 nt Gateway expression vector pAGRIKOLA... 9461 bp Gateway expression vector pAGRIKOLA-CATMA4a34470 QL-ELE-00-007 180 bp View
MK896900.1 nt Plant binary expression vector pNC-... 11186 bp Plant binary expression vector pNC-Cam1304-SubN QL-ELE-00-007 180 bp View
LT725458.1 nt Gateway expression vector pAGRIKOLA... 9763 bp Gateway expression vector pAGRIKOLA-CATMA4a34490 QL-ELE-00-007 180 bp View
GV624787.1 emblrelpat Sequence 82 from patent US 7645604. 8671 bp unidentified QL-ELE-00-007 180 bp View
LT725459.1 nt Gateway expression vector pAGRIKOLA... 9441 bp Gateway expression vector pAGRIKOLA-CATMA4a35010 QL-ELE-00-007 180 bp View
MK896903.1 nt Plant binary expression vector pNC-... 4794 bp Plant binary expression vector pNC-Green-35S QL-ELE-00-007 180 bp View
LT725460.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA4a35170 QL-ELE-00-007 180 bp View
JC986264.1 emblrelpat Sequence 46 from Patent EP2811024. 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725461.1 nt Gateway expression vector pAGRIKOLA... 9493 bp Gateway expression vector pAGRIKOLA-CATMA4a35660 QL-ELE-00-007 180 bp View
MK896904.1 nt Plant binary expression vector pNC-... 6122 bp Plant binary expression vector pNC-Green0029-35S QL-ELE-00-007 180 bp View
LT725462.1 nt Gateway expression vector pAGRIKOLA... 10331 bp Gateway expression vector pAGRIKOLA-CATMA4a35845 QL-ELE-00-007 180 bp View
HI410678.1 emblrelpat Sequence 8803 from Patent EP2074227. 5032 bp synthetic construct QL-ELE-00-007 180 bp View
LT725463.1 nt Gateway expression vector pAGRIKOLA... 9517 bp Gateway expression vector pAGRIKOLA-CATMA4a36230 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.