Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725358.1 nt Gateway expression vector pAGRIKOLA... 9457 bp Gateway expression vector pAGRIKOLA-CATMA4a12140 QL-ELE-00-007 180 bp View
AP018999.1 nt Gateway binary vector pGWB768 DNA, ... 12051 bp Gateway binary vector pGWB768 QL-ELE-00-007 180 bp View
LT725359.1 nt Gateway expression vector pAGRIKOLA... 9605 bp Gateway expression vector pAGRIKOLA-CATMA4a14050 QL-ELE-00-007 180 bp View
AP018999.1 nt Gateway binary vector pGWB768 DNA, ... 12051 bp Gateway binary vector pGWB768 QL-ELE-00-007 180 bp View
LT725360.1 nt Gateway expression vector pAGRIKOLA... 9469 bp Gateway expression vector pAGRIKOLA-CATMA4a14135 QL-ELE-00-007 180 bp View
EA284483.1 emblrelpat Sequence 55 from patent US 7262338. 5635 bp unidentified QL-ELE-00-007 180 bp View
LT725361.1 nt Gateway expression vector pAGRIKOLA... 9499 bp Gateway expression vector pAGRIKOLA-CATMA4a14780 QL-ELE-00-007 180 bp View
AP019000.1 nt Gateway binary vector pGWB771 DNA, ... 12213 bp Gateway binary vector pGWB771 QL-ELE-00-007 180 bp View
LT725362.1 nt Gateway expression vector pAGRIKOLA... 9553 bp Gateway expression vector pAGRIKOLA-CATMA4a14920 QL-ELE-00-007 180 bp View
AP019000.1 nt Gateway binary vector pGWB771 DNA, ... 12213 bp Gateway binary vector pGWB771 QL-ELE-00-007 180 bp View
LT725363.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA4a15260 QL-ELE-00-007 180 bp View
EA284484.1 emblrelpat Sequence 56 from patent US 7262338. 6299 bp unidentified QL-ELE-00-007 180 bp View
LT725364.1 nt Gateway expression vector pAGRIKOLA... 9491 bp Gateway expression vector pAGRIKOLA-CATMA4a16850 QL-ELE-00-007 180 bp View
HJ491934.1 emblrelpat Sequence 57 from patent US 8557585. 8513 bp unidentified QL-ELE-00-007 180 bp View
LT725365.1 nt Gateway expression vector pAGRIKOLA... 9521 bp Gateway expression vector pAGRIKOLA-CATMA4a16870 QL-ELE-00-007 180 bp View
AP019001.1 nt Gateway binary vector pGWB785 DNA, ... 12063 bp Gateway binary vector pGWB785 QL-ELE-00-007 180 bp View
AP019001.1 nt Gateway binary vector pGWB785 DNA, ... 12063 bp Gateway binary vector pGWB785 QL-ELE-00-007 180 bp View
LT725367.1 nt Gateway expression vector pAGRIKOLA... 9495 bp Gateway expression vector pAGRIKOLA-CATMA4a18090 QL-ELE-00-007 180 bp View
EA284486.1 emblrelpat Sequence 58 from patent US 7262338. 5715 bp unidentified QL-ELE-00-007 180 bp View
LT725368.1 nt Gateway expression vector pAGRIKOLA... 9801 bp Gateway expression vector pAGRIKOLA-CATMA4a18150 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.