Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725653.1 nt Gateway expression vector pAGRIKOLA... 9703 bp Gateway expression vector pAGRIKOLA-CATMA5c64353 QL-ELE-00-007 180 bp View
AP018990.1 nt Gateway binary vector pGWB662 DNA, ... 11522 bp Gateway binary vector pGWB662 QL-ELE-00-007 180 bp View
LT725654.1 nt Gateway expression vector pAGRIKOLA... 9587 bp Gateway expression vector pAGRIKOLA-CATMA5c64572 QL-ELE-00-007 180 bp View
DD434544.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 5630 bp unidentified QL-ELE-00-007 180 bp View
LT725655.1 nt Gateway expression vector pAGRIKOLA... 9435 bp Gateway expression vector pAGRIKOLA-CATMA5c64614 QL-ELE-00-007 180 bp View
HW801724.1 emblrelpat JP 2014530006-A/14: Increasing Viru... 4897 bp synthetic construct QL-ELE-00-007 180 bp View
AP018991.1 nt Gateway binary vector pGWB665 DNA, ... 11447 bp Gateway binary vector pGWB665 QL-ELE-00-007 180 bp View
LT725331.1 nt Gateway expression vector pAGRIKOLA... 9503 bp Gateway expression vector pAGRIKOLA-CATMA3c57629 QL-ELE-00-007 180 bp View
HC510454.1 emblrelpat Sequence 44 from Patent WO2010036946. 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725332.1 nt Gateway expression vector pAGRIKOLA... 9589 bp Gateway expression vector pAGRIKOLA-CATMA3c57753 QL-ELE-00-007 180 bp View
DD434547.1 emblrelpat ENHANCED ACCUMULATION OF CAROTENOID... 5180 bp unidentified QL-ELE-00-007 180 bp View
LT725333.1 nt Gateway expression vector pAGRIKOLA... 9439 bp Gateway expression vector pAGRIKOLA-CATMA3c57756 QL-ELE-00-007 180 bp View
AP018992.1 nt Gateway binary vector pGWB668 DNA, ... 11429 bp Gateway binary vector pGWB668 QL-ELE-00-007 180 bp View
LT725334.1 nt Gateway expression vector pAGRIKOLA... 9691 bp Gateway expression vector pAGRIKOLA-CATMA3c57788 QL-ELE-00-007 180 bp View
AP018992.1 nt Gateway binary vector pGWB668 DNA, ... 11429 bp Gateway binary vector pGWB668 QL-ELE-00-007 180 bp View
LT725335.1 nt Gateway expression vector pAGRIKOLA... 9435 bp Gateway expression vector pAGRIKOLA-CATMA3c57789 QL-ELE-00-007 180 bp View
HI654103.1 emblrelpat Sequence 10 from Patent EP2208788. 6714 bp synthetic construct QL-ELE-00-007 180 bp View
LT725336.1 nt Gateway expression vector pAGRIKOLA... 9483 bp Gateway expression vector pAGRIKOLA-CATMA3c57802 QL-ELE-00-007 180 bp View
HI006473.1 emblrelpat Sequence 13 from Patent EP1827078. 9754 bp synthetic construct QL-ELE-00-007 180 bp View
LT725337.1 nt Gateway expression vector pAGRIKOLA... 9729 bp Gateway expression vector pAGRIKOLA-CATMA3c57822 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.