Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DD360015.1 emblrelpat Method for the genetic modification... 15739 bp unidentified QL-ELE-00-007 180 bp View
LT725026.1 nt Gateway expression vector pAGRIKOLA... 9621 bp Gateway expression vector pAGRIKOLA-CATMA2a13300 QL-ELE-00-007 180 bp View
DD360040.1 emblrelpat Method for the genetic modification... 18449 bp unidentified QL-ELE-00-007 180 bp View
LT725027.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA2a13330 QL-ELE-00-007 180 bp View
AP018982.1 nt Gateway binary vector pGWB491 DNA, ... 11729 bp Gateway binary vector pGWB491 QL-ELE-00-007 180 bp View
AP018982.1 nt Gateway binary vector pGWB491 DNA, ... 11729 bp Gateway binary vector pGWB491 QL-ELE-00-007 180 bp View
LT725028.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a13360 QL-ELE-00-007 180 bp View
DI123518.1 emblrelpat Vector for Preparation of Transform... 9978 bp unidentified QL-ELE-00-007 180 bp View
FB573883.1 emblrelpat Sequence 2 from Patent EP1865064. 6038 bp Escherichia coli QL-ELE-00-007 180 bp View
LT725029.1 nt Gateway expression vector pAGRIKOLA... 9497 bp Gateway expression vector pAGRIKOLA-CATMA2a13370 QL-ELE-00-007 180 bp View
HV245498.1 emblrelpat JP 2009529863-A/8: D-AMINOACID SELE... 6820 bp synthetic construct QL-ELE-00-007 180 bp View
LT725030.1 nt Gateway expression vector pAGRIKOLA... 9465 bp Gateway expression vector pAGRIKOLA-CATMA2a13400 QL-ELE-00-007 180 bp View
AP018983.1 nt Gateway binary vector pGWB562 DNA, ... 11987 bp Gateway binary vector pGWB562 QL-ELE-00-007 180 bp View
LT725031.1 nt Gateway expression vector pAGRIKOLA... 9491 bp Gateway expression vector pAGRIKOLA-CATMA2a13410 QL-ELE-00-007 180 bp View
AP018983.1 nt Gateway binary vector pGWB562 DNA, ... 11987 bp Gateway binary vector pGWB562 QL-ELE-00-007 180 bp View
FB700509.1 emblrelpat Sequence 5 from Patent WO2007107853. 8860 bp Agrobacterium QL-ELE-00-007 180 bp View
LT725033.1 nt Gateway expression vector pAGRIKOLA... 9553 bp Gateway expression vector pAGRIKOLA-CATMA2a13440 QL-ELE-00-007 180 bp View
HH996443.1 emblrelpat Sequence 3 from Patent EP1799028. 253 bp synthetic construct QL-ELE-00-007 180 bp View
LT725034.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA2a13465 QL-ELE-00-007 180 bp View
AP018984.1 nt Gateway binary vector pGWB565 DNA, ... 11912 bp Gateway binary vector pGWB565 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.