Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724994.1 nt Gateway expression vector pAGRIKOLA... 9679 bp Gateway expression vector pAGRIKOLA-CATMA2a12420 QL-ELE-00-007 180 bp View
AP018973.1 nt Gateway binary vector R4L1pGWB785 D... 12066 bp Gateway binary vector R4L1pGWB785 QL-ELE-00-007 180 bp View
LT724995.1 nt Gateway expression vector pAGRIKOLA... 9543 bp Gateway expression vector pAGRIKOLA-CATMA2a12430 QL-ELE-00-007 180 bp View
DI175593.1 emblrelpat KR 1020100011173-A/1: Plant transfo... 5946 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
DI122223.1 emblrelpat Vector for Preparation of Transform... 9762 bp unidentified QL-ELE-00-007 180 bp View
HH975379.1 emblrelpat Sequence 3 from Patent EP1687438. 8862 bp synthetic construct QL-ELE-00-007 180 bp View
LT724997.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA2a12560 QL-ELE-00-007 180 bp View
AP018974.1 nt Gateway binary vector R4L1pGWB788 D... 12048 bp Gateway binary vector R4L1pGWB788 QL-ELE-00-007 180 bp View
LT724998.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA2a12570 QL-ELE-00-007 180 bp View
AP018974.1 nt Gateway binary vector R4L1pGWB788 D... 12048 bp Gateway binary vector R4L1pGWB788 QL-ELE-00-007 180 bp View
LT724999.1 nt Gateway expression vector pAGRIKOLA... 9707 bp Gateway expression vector pAGRIKOLA-CATMA2a12610 QL-ELE-00-007 180 bp View
CS417150.1 emblrelpat Sequence 110 from Patent WO2006094976. 6077 bp unidentified QL-ELE-00-007 180 bp View
LT725000.1 nt Gateway expression vector pAGRIKOLA... 9545 bp Gateway expression vector pAGRIKOLA-CATMA2a12620 QL-ELE-00-007 180 bp View
HH975379.1 emblrelpat Sequence 3 from Patent EP1687438. 8862 bp synthetic construct QL-ELE-00-007 180 bp View
LT725001.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA2a12630 QL-ELE-00-007 180 bp View
AP018975.1 nt Gateway binary vector R4L1pGWB791 D... 12210 bp Gateway binary vector R4L1pGWB791 QL-ELE-00-007 180 bp View
LT725002.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA2a12640 QL-ELE-00-007 180 bp View
AP018975.1 nt Gateway binary vector R4L1pGWB791 D... 12210 bp Gateway binary vector R4L1pGWB791 QL-ELE-00-007 180 bp View
LT725003.1 nt Gateway expression vector pAGRIKOLA... 9713 bp Gateway expression vector pAGRIKOLA-CATMA2a12660 QL-ELE-00-007 180 bp View
CS417151.1 emblrelpat Sequence 111 from Patent WO2006094976. 15790 bp unidentified QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.