Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724907.1 nt Gateway expression vector pAGRIKOLA... 10135 bp Gateway expression vector pAGRIKOLA-CATMA2a00340 QL-ELE-00-007 180 bp View
EA021604.1 emblrelpat Sequence 40 from patent US 7132589. 5001 bp unidentified QL-ELE-00-007 180 bp View
LT724908.1 nt Gateway expression vector pAGRIKOLA... 9527 bp Gateway expression vector pAGRIKOLA-CATMA2a00350 QL-ELE-00-007 180 bp View
AP018967.1 nt Gateway binary vector R4L1pGWB688 D... 11426 bp Gateway binary vector R4L1pGWB688 QL-ELE-00-007 180 bp View
LT724909.1 nt Gateway expression vector pAGRIKOLA... 9573 bp Gateway expression vector pAGRIKOLA-CATMA2a00360 QL-ELE-00-007 180 bp View
AP018967.1 nt Gateway binary vector R4L1pGWB688 D... 11426 bp Gateway binary vector R4L1pGWB688 QL-ELE-00-007 180 bp View
LT724910.1 nt Gateway expression vector pAGRIKOLA... 9551 bp Gateway expression vector pAGRIKOLA-CATMA2a00390 QL-ELE-00-007 180 bp View
HH975377.1 emblrelpat Sequence 1 from Patent EP1687438. 8812 bp synthetic construct QL-ELE-00-007 180 bp View
LT724911.1 nt Gateway expression vector pAGRIKOLA... 9451 bp Gateway expression vector pAGRIKOLA-CATMA2a00400 QL-ELE-00-007 180 bp View
AP018968.1 nt Gateway binary vector R4L1pGWB691 D... 11588 bp Gateway binary vector R4L1pGWB691 QL-ELE-00-007 180 bp View
LT724912.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00410 QL-ELE-00-007 180 bp View
EA059879.1 emblrelpat Sequence 32 from patent US 7166770. 4224 bp unidentified QL-ELE-00-007 180 bp View
LT724980.1 nt Gateway expression vector pAGRIKOLA... 9579 bp Gateway expression vector pAGRIKOLA-CATMA2a02260 QL-ELE-00-007 180 bp View
HI561113.1 emblrelpat Sequence 5 from Patent EP2183355. 7228 bp synthetic construct QL-ELE-00-007 180 bp View
LT724981.1 nt Gateway expression vector pAGRIKOLA... 9445 bp Gateway expression vector pAGRIKOLA-CATMA2a02420 QL-ELE-00-007 180 bp View
AP018969.1 nt Gateway binary vector R4L1pGWB762 D... 12147 bp Gateway binary vector R4L1pGWB762 QL-ELE-00-007 180 bp View
LT724982.1 nt Gateway expression vector pAGRIKOLA... 9499 bp Gateway expression vector pAGRIKOLA-CATMA2a02595 QL-ELE-00-007 180 bp View
DI035735.1 emblrelpat PLANT TRANSFORMATION VECTOR. 12982 bp Agrobacterium sp. QL-ELE-00-007 180 bp View
LT724983.1 nt Gateway expression vector pAGRIKOLA... 9805 bp Gateway expression vector pAGRIKOLA-CATMA2a03690 QL-ELE-00-007 180 bp View
DI035735.1 emblrelpat PLANT TRANSFORMATION VECTOR. 12982 bp Agrobacterium sp. QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.