Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724854.1 nt Gateway expression vector pAGRIKOLA... 9777 bp Gateway expression vector pAGRIKOLA-CATMA1a58200 QL-ELE-00-007 180 bp View
AP018953.1 nt Gateway binary vector R4L1pGWB488 D... 11569 bp Gateway binary vector R4L1pGWB488 QL-ELE-00-007 180 bp View
LT724855.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA1a58320 QL-ELE-00-007 180 bp View
AP018953.1 nt Gateway binary vector R4L1pGWB488 D... 11569 bp Gateway binary vector R4L1pGWB488 QL-ELE-00-007 180 bp View
LT724856.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA1a60210 QL-ELE-00-007 180 bp View
MS792781.1 emblrelpat Sequence 18 from Patent WO2017025360. 255 bp Arabidopsis thaliana QL-ELE-00-007 180 bp View
LT724857.1 nt Gateway expression vector pAGRIKOLA... 9503 bp Gateway expression vector pAGRIKOLA-CATMA1a60220 QL-ELE-00-007 180 bp View
AR703089.1 emblrelpat Sequence 3 from patent US 6924363. 2115 bp unidentified QL-ELE-00-007 180 bp View
LT724858.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA1a60380 QL-ELE-00-007 180 bp View
AP018954.1 nt Gateway binary vector R4L1pGWB491 D... 11731 bp Gateway binary vector R4L1pGWB491 QL-ELE-00-007 180 bp View
LT724859.1 nt Gateway expression vector pAGRIKOLA... 9469 bp Gateway expression vector pAGRIKOLA-CATMA1a60420 QL-ELE-00-007 180 bp View
AP018954.1 nt Gateway binary vector R4L1pGWB491 D... 11731 bp Gateway binary vector R4L1pGWB491 QL-ELE-00-007 180 bp View
AR707157.1 emblrelpat Sequence 26 from patent US 6933146. 17681 bp unidentified QL-ELE-00-007 180 bp View
LT724861.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA1a61590 QL-ELE-00-007 180 bp View
HH833972.1 emblrelpat Sequence 4 from Patent WO2010104848. 16843 bp synthetic construct QL-ELE-00-007 180 bp View
LT724862.1 nt Gateway expression vector pAGRIKOLA... 9637 bp Gateway expression vector pAGRIKOLA-CATMA1a61870 QL-ELE-00-007 180 bp View
AP018955.1 nt Gateway binary vector R4L1pGWB562 D... 11989 bp Gateway binary vector R4L1pGWB562 QL-ELE-00-007 180 bp View
LT724863.1 nt Gateway expression vector pAGRIKOLA... 9607 bp Gateway expression vector pAGRIKOLA-CATMA1a61960 QL-ELE-00-007 180 bp View
MX926865.1 emblrelpat Sequence 9 from patent US 11053514. 7914 bp unidentified QL-ELE-00-007 180 bp View
LT724864.1 nt Gateway expression vector pAGRIKOLA... 9503 bp Gateway expression vector pAGRIKOLA-CATMA1a62660 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.