Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HJ230498.1 emblrelpat Sequence 2 from patent US 8465915. 12261 bp unidentified QL-ELE-00-007 180 bp View
LT725256.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA3a20670 QL-ELE-00-007 180 bp View
MX624945.1 emblrelpat Sequence 258 from patent US 10988788. 14662 bp unidentified QL-ELE-00-007 180 bp View
LT725257.1 nt Gateway expression vector pAGRIKOLA... 9643 bp Gateway expression vector pAGRIKOLA-CATMA3a22590 QL-ELE-00-007 180 bp View
AP018636.1 nt Gateway vector R4L1pMpGWB135 DNA, c... 12867 bp Gateway vector R4L1pMpGWB135 QL-ELE-00-007 180 bp View
LT725258.1 nt Gateway expression vector pAGRIKOLA... 9641 bp Gateway expression vector pAGRIKOLA-CATMA3a22715 QL-ELE-00-007 180 bp View
HJ230499.1 emblrelpat Sequence 3 from patent US 8465915. 6256 bp unidentified QL-ELE-00-007 180 bp View
LT725259.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA3a22725 QL-ELE-00-007 180 bp View
AP018637.1 nt Gateway vector R4L1pMpGWB139 DNA, c... 11934 bp Gateway vector R4L1pMpGWB139 QL-ELE-00-007 180 bp View
LT725260.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA3a22770 QL-ELE-00-007 180 bp View
MX624948.1 emblrelpat Sequence 261 from patent US 10988788. 14917 bp unidentified QL-ELE-00-007 180 bp View
LT725261.1 nt Gateway expression vector pAGRIKOLA... 9669 bp Gateway expression vector pAGRIKOLA-CATMA3a22990 QL-ELE-00-007 180 bp View
AP018638.1 nt Gateway vector R4L1pMpGWB194 DNA, c... 12063 bp Gateway vector R4L1pMpGWB194 QL-ELE-00-007 180 bp View
LT725262.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA3a22995 QL-ELE-00-007 180 bp View
OF130331.1 emblrelpat KR 1020200134346-A/49: PLANT REGULA... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725263.1 nt Gateway expression vector pAGRIKOLA... 9641 bp Gateway expression vector pAGRIKOLA-CATMA3a23110 QL-ELE-00-007 180 bp View
AP018639.1 nt Gateway vector R4L1pMpGWB195 DNA, c... 11961 bp Gateway vector R4L1pMpGWB195 QL-ELE-00-007 180 bp View
MX624951.1 emblrelpat Sequence 264 from patent US 10988788. 14992 bp unidentified QL-ELE-00-007 180 bp View
LT725265.1 nt Gateway expression vector pAGRIKOLA... 9627 bp Gateway expression vector pAGRIKOLA-CATMA3a23210 QL-ELE-00-007 180 bp View
AP018640.1 nt Gateway vector R4L1pMpGWB204 DNA, c... 12544 bp Gateway vector R4L1pMpGWB204 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.