Amplicon details

Amplicon:

582 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ccgaaaacaa agaaaggttc
151   agaaagcaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggggtt gactgcattg gtcgaggaat ctttctatcg agacttcaga
251   aaggatgaag gataaacgta tatacatatg tattcaatac tctatcaaat
301   gaaatgatta atgacgaccc taatctgttc tgtttttttt tatgaaaaaa
351   aaggaagaat tggtgtgaat cgattccaca ttgaagttga agaaagaacc
401   gaatattcat tgatcaaatc actcactcca tagtctgata gttcttttga
451   agaactgatt aatcggacga gaataaagat agagtcccgt tctacatgtc
501   aataccggca acaatgaaat ttatagtaag aggaaaatcc gtcgacttta
551   aaaatcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF688815.1 nt Heliotropium pycnophyllum voucher 2... 1064 bp Heliotropium pycnophyllum QL-PLN-00-007 582 bp View
EF688813.1 nt Heliotropium pycnophyllum voucher 2... 1053 bp Heliotropium pycnophyllum QL-PLN-00-007 582 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.