Amplicon details

Amplicon:

552 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tggataactt tcaaattcag agaaaccctg gaataaaaaa
101   ggggcaatcc tgagccaaat ccgatttttt gaaatgaaaa aaagtttata
151   tagacagaat aaataaaaaa ggataggtgc agagactcaa tggaagctgt
201   tctaataaat ggagttgact gtcttgcatt agtaaagtaa gggaaccttt
251   cgttaaaatt gcggattcaa agtaaaggat aaccctataa atacatatac
301   gtactgaaag actatctcaa ataattaatg taattatgaa aaataaaata
351   aaaatattga atcgatttca agttgaagaa aaaatcaatt gatcaaatca
401   ttcactccac agtctgataa ataactaatt aatcggacga gaataaagat
451   agagtcccat tctacatgtt aatattgaca acaaggaaat ttatagtaag
501   aggaaaatcc gtcgacttta gaaatcgtga gggttcaagt ccctctatcc
551   cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ787741.1 nt Viola chaerophylloides voucher KWNU... 950 bp Viola chaerophylloides QL-PLN-00-007 552 bp View
DQ787732.1 nt Viola albida voucher KWNU57210 tRNA... 950 bp Viola albida QL-PLN-00-007 552 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.