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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 173 bp 
1     ggacctcctg tcatctcacc ttgcccctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB267707.1 nt Moss transformation vector pTN85 DN... 4325 bp Moss transformation vector pTN85 QL-ELE-00-003 173 bp View
AB697058.1 nt Moss transformation vector pCTRN-NP... 6023 bp Moss transformation vector pCTRN-NPTII 2 QL-ELE-00-003 173 bp View
AB720111.1 nt Moss transformation vector pTN82 DN... 2796 bp Moss transformation vector pTN82 QL-ELE-00-003 173 bp View
ON092626.1 nt Moss mCitrine knock-in vector, comp... 6023 bp Moss mCitrine knock-in vector QL-ELE-00-003 173 bp View
ON092627.1 nt Moss mClover3 knock-in vector, comp... 6023 bp Moss mClover3 knock-in vector QL-ELE-00-003 173 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.