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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 123 bp 
1     AGTTTGTAGG TTTTGATGTT ACATTGAGTG AAAGTGAATG AAAGGGTGTG
51    TAAACATAAA ATAATTCGAA CAACCATGAC ATGTTGGACT GGAGGTCAAA
101   ATCAGTAGGC GGTTCAAAGG TGT

An identical amplicon is found in the following matches:

Amplicons found in the selected databases
Record ID Database Record description Record length Taxon Method Amplicon size Match details
CP032246.1 nt Gossypioides kirkii chromosome KI_03 42061019 bp Gossypioides kirkii QT-TAX-GH-016 123 bp View
AY117069.1 nt Gossypioides kirkii putative SAH7 p... 749 bp Gossypioides kirkii QT-TAX-GH-016 123 bp View
CP032246.1 nt Gossypioides kirkii chromosome KI_03 42061019 bp Gossypioides kirkii QT-TAX-GH-017 123 bp View
AY117069.1 nt Gossypioides kirkii putative SAH7 p... 749 bp Gossypioides kirkii QT-TAX-GH-017 123 bp View
AY117069.1 nt Gossypioides kirkii putative SAH7 p... 749 bp Gossypioides kirkii QT-TAX-GH-021 123 bp View
CP032246.1 nt Gossypioides kirkii chromosome KI_03 42061019 bp Gossypioides kirkii QT-TAX-GH-021 123 bp View
AY117069.1 nt Gossypioides kirkii putative SAH7 p... 749 bp Gossypioides kirkii QT-TAX-GH-022 123 bp View
CP032246.1 nt Gossypioides kirkii chromosome KI_03 42061019 bp Gossypioides kirkii QT-TAX-GH-022 123 bp View

Related publications:

  • Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
  • Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.