Amplicon details

Amplicon:

610 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg aggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttccaaa
251   ttttagaaag aagggcttta tacacctaat aaacacgtat agatactgac
301   gattaatcac ggaacccata ttataatata ggttctttat tcttttttag
351   aatgcaattt gaaatagaaa tgattatgaa ataaaaaatt cagaattttt
401   tgtagaatta tttggaatcc attccaattg aatatttagt aatcaaatcc
451   ttcaattcaa agttttgagg tctttaaaac agtggattaa tcggacgagg
501   acaaagagag agtcccattc tacatgtcaa tactgacaac aatgaaattt
551   ctagtaaaag gaaaatccgt cgactttata agtcgtgagg gttcaagtcc
601   ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ860562.1 nt Festuca rubra tRNA-Leu (trnL) gene,... 610 bp Festuca rubra QL-PLN-00-007 610 bp View
MN309826.1 nt Festuca rubra subsp. fallax chlorop... 133841 bp Festuca rubra subsp. fallax QL-PLN-00-007 610 bp View
KY999949.1 nt Festuca kirelowii isolate 67 tRNA-L... 1020 bp Festuca rubra subsp. kirelowii QL-PLN-00-007 610 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.