Amplicon details

Amplicon:

603 bp
1     cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51    acctactaag tgagaacttt caaattcaga gaaaccctgg aatttaaaac
101   acgggcaatc ctgagccaac tcctgctttc caaaaaggaa gaataaaaaa
151   ggataggtgc agagactcaa tggaagctgt tctaacaaat ggagttgtct
201   gtcatgcatt gtgctatgtt atacgaattc ttacatctaa actccaaaaa
251   ggatgaagaa gaaacctata ggcatacgta cttaatatct taatatataa
301   aatctaattt ttttataata gatctaagat aaaatgaaaa ttgatgacga
351   cccgaatctt tattttatga atatgaacaa atggaagaat tattatgaat
401   cgattccgcg ttgaagaaag aatcgaatat tcgtttctta acttaaagca
451   tttactccac agtctgatag atctaccgat ccatcggatg agaatgaaga
501   tagagtccca ttctacgtgt cactcccgac aacaatgaaa tttatagtaa
551   gaggaaaatc cgtcgacttt taaaatcgtg agggttcaag tccctctatc
601   ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ860530.1 nt Bistorta vivipara tRNA-Leu (trnL) g... 603 bp Bistorta vivipara QL-PLN-00-007 603 bp View
MW770449.1 nt Bistorta coriacea chloroplast, comp... 158839 bp Bistorta coriacea QL-PLN-00-007 603 bp View
ON229545.1 nt Bistorta macrophylla voucher SD429 ... 158838 bp Bistorta macrophylla QL-PLN-00-007 603 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.