Amplicon details

Amplicon:

79 bp
1     cgtcttcaaa gcaagtggat tgatgtgata tctccactga cgtaagggat
51    gacgcacaat cccactatcc ttcgcaaga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF234316.1 nt Binary vector pCAMBIA-2301, complet... 11633 bp Binary vector pCAMBIA-2301 QT-ELE-00-001 79 bp View
AF234316.1 nt Binary vector pCAMBIA-2301, complet... 11633 bp Binary vector pCAMBIA-2301 QT-ELE-00-001 79 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QT-ELE-00-001 79 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QT-ELE-00-001 79 bp View
AJ414109.1 nt Binary vector pGV4126 DNA, region b... 5341 bp Binary vector pGV4126 QT-ELE-00-001 79 bp View
AJ414110.1 nt Binary vector pGV4128 DNA, region b... 5439 bp Binary vector pGV4128 QT-ELE-00-001 79 bp View
AJ414111.1 nt Binary vector pGV4223 DNA, region b... 5582 bp Binary vector pGV4223 QT-ELE-00-001 79 bp View
AJ414113.1 nt Cloning vector pGV4112 DNA, complet... 3792 bp Cloning vector pGV4112 QT-ELE-00-001 79 bp View
AY147202.1 nt Binary vector pGV4939 kanamycin res... 6643 bp Binary vector pGV4939 QT-ELE-00-001 79 bp View
AJ315956.1 nt Binary Cloning vector pAC161 10828 bp Binary cloning vector pAC161 QT-ELE-00-001 79 bp View
AJ537513.1 nt Synthetic construct plasmid pAC106 10877 bp synthetic construct QT-ELE-00-001 79 bp View
AJ537513.1 nt Synthetic construct plasmid pAC106 10877 bp synthetic construct QT-ELE-00-001 79 bp View
AJ551314.1 nt Transfection vector pBTdest 4462 bp Transfection vector pBTdest QT-ELE-00-001 79 bp View
AY456412.1 nt Cloning vector pZGA22, complete seq... 14701 bp Cloning vector pZGA22 QT-ELE-00-001 79 bp View
AY488510.1 nt Gene trapping vector pEU334AN, comp... 21188 bp Gene trapping vector pEU334AN QT-ELE-00-001 79 bp View
AY488511.1 nt Gene trapping vector pEU334bn, comp... 21188 bp Gene trapping vector pEU334bn QT-ELE-00-001 79 bp View
AY737283.1 nt C-terminal TAP T-DNA vector pYL436,... 12607 bp C-terminal TAP T-DNA vector pYL436 QT-ELE-00-001 79 bp View
AY737283.1 nt C-terminal TAP T-DNA vector pYL436,... 12607 bp C-terminal TAP T-DNA vector pYL436 QT-ELE-00-001 79 bp View
AY788908.1 nt N-terminal TAPa T-DNA vector pN-TAP... 12537 bp N-terminal TAPa T-DNA vector pN-TAPa QT-ELE-00-001 79 bp View
NRN_CS158621 nrnl1 Sequence 9 from Patent WO2005080544... 338 bp unidentified QT-ELE-00-001 79 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.