Amplicon details

Amplicon:

592 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101   gggcaatcct gagccaaatc ctgttttccg aaaaccaata agagttcaga
151   aagggagaat aaaaaaagga taggtgcaga gactcaacgg aagctgttct
201   aacaaatgga gttgacgaca tttcttttcg ttagtaaagg aatccttcca
251   tctaaactcc agaaaagaaa ggatcaagga tgaacatata tatgtatact
301   gaaatattat ttcaattgat tagaccagac agaccaaaaa tctctatttt
351   tgaatattta tatgacaaat gaaagatgtg aatagattcc aagttgaaga
401   aagaatcaaa tatttattga tcaaatcatt cattccatga tagtatgata
451   aatcttttga agaactgatt aatcggacga gaataaagat agagtcccat
501   tctacatgtc aataccgaca acaatgaaat ttagagtaag aggaaaatcc
551   gtcgacttta gaaatcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ208892.1 nt Caesalpinia hintonii isolate Zic7 t... 998 bp Erythrostemon hintonii QL-PLN-00-007 592 bp View
DQ208893.1 nt Caesalpinia hintonii isolate Zic8 t... 992 bp Erythrostemon hintonii QL-PLN-00-007 592 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.