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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG997511.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997512.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997519.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997521.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997523.1 nt Oryza sativa genome assembly, organ... 134501 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997524.1 nt Oryza sativa genome assembly, organ... 134539 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997531.1 nt Oryza sativa genome assembly, organ... 134533 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997535.1 nt Oryza sativa genome assembly, organ... 134501 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997536.1 nt Oryza sativa genome assembly, organ... 134537 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997539.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997550.1 nt Oryza sativa genome assembly, organ... 134501 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997551.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997553.1 nt Oryza sativa genome assembly, organ... 134497 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997554.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997555.1 nt Oryza sativa genome assembly, organ... 134582 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997562.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997563.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997568.1 nt Oryza sativa genome assembly, organ... 134550 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997570.1 nt Oryza sativa genome assembly, organ... 134550 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.