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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG997467.1 nt Oryza sativa genome assembly, organ... 134536 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997471.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997472.1 nt Oryza sativa genome assembly, organ... 134504 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997474.1 nt Oryza sativa genome assembly, organ... 134558 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997478.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997479.1 nt Oryza sativa genome assembly, organ... 134529 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997480.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997483.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997486.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997492.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997495.1 nt Oryza sativa genome assembly, organ... 134553 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997497.1 nt Oryza sativa genome assembly, organ... 134496 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997498.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997500.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997501.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997502.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997504.1 nt Oryza sativa genome assembly, organ... 134558 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997505.1 nt Oryza sativa genome assembly, organ... 134536 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997506.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.