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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG997344.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997345.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997346.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997347.1 nt Oryza sativa genome assembly, organ... 134504 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997348.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997352.1 nt Oryza sativa genome assembly, organ... 134558 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997353.1 nt Oryza sativa genome assembly, organ... 134501 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997354.1 nt Oryza sativa genome assembly, organ... 134549 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997355.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997357.1 nt Oryza sativa genome assembly, organ... 134270 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997358.1 nt Oryza sativa genome assembly, organ... 134496 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997359.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997360.1 nt Oryza sativa genome assembly, organ... 134536 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997361.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997363.1 nt Oryza sativa genome assembly, organ... 134529 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997364.1 nt Oryza sativa genome assembly, organ... 134266 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997365.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997366.1 nt Oryza sativa genome assembly, organ... 134268 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997367.1 nt Oryza sativa genome assembly, organ... 134534 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.