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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MV705960.1 emblrelpat Sequence 4319 from patent US 10774340. 13722 bp unidentified QL-PLN-00-007 615 bp View
KF359907.1 nt Oryza longistaminata chloroplast, c... 134557 bp Oryza longistaminata QL-PLN-00-007 615 bp View
CP018170.1 nt Oryza sativa Indica Group cultivar ... 134546 bp Oryza sativa Indica Group QL-PLN-00-007 615 bp View
MO172213.1 emblrelpat Sequence 4319 from patent US 10337023. 13722 bp unidentified QL-PLN-00-007 615 bp View
EA703943.1 emblrelpat Sequence 82822 from patent US 7365185. 4745 bp unidentified QL-PLN-00-007 615 bp View
GX568797.1 emblrelpat Sequence 82822 from patent US 7790958. 4745 bp unidentified QL-PLN-00-007 615 bp View
GX917680.1 emblrelpat Sequence 13588 from patent US 7868149. 8037 bp unidentified QL-PLN-00-007 615 bp View
GX918448.1 emblrelpat Sequence 14356 from patent US 7868149. 23390 bp unidentified QL-PLN-00-007 615 bp View
GX926227.1 emblrelpat Sequence 22135 from patent US 7868149. 67934 bp unidentified QL-PLN-00-007 615 bp View
GX931306.1 emblrelpat Sequence 27214 from patent US 7868149. 13945 bp unidentified QL-PLN-00-007 615 bp View
GX932336.1 emblrelpat Sequence 28244 from patent US 7868149. 14535 bp unidentified QL-PLN-00-007 615 bp View
GX932470.1 emblrelpat Sequence 28378 from patent US 7868149. 1231 bp unidentified QL-PLN-00-007 615 bp View
GX933219.1 emblrelpat Sequence 29127 from patent US 7868149. 7604 bp unidentified QL-PLN-00-007 615 bp View
GX936024.1 emblrelpat Sequence 31932 from patent US 7868149. 48874 bp unidentified QL-PLN-00-007 615 bp View
GX938151.1 emblrelpat Sequence 34059 from patent US 7868149. 11568 bp unidentified QL-PLN-00-007 615 bp View
GX940029.1 emblrelpat Sequence 35937 from patent US 7868149. 4745 bp unidentified QL-PLN-00-007 615 bp View
GX941094.1 emblrelpat Sequence 37002 from patent US 7868149. 7553 bp unidentified QL-PLN-00-007 615 bp View
GX950513.1 emblrelpat Sequence 46421 from patent US 7868149. 9948 bp unidentified QL-PLN-00-007 615 bp View
MI849046.1 emblrelpat Sequence 4319 from patent US 10006042. 13722 bp unidentified QL-PLN-00-007 615 bp View
NRN_EA703943 nrnl1 Sequence 82822 from patent US 73651... 4745 bp unidentified QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.