Amplicon details |
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Amplicon: |
615 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa 101 ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa 251 attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg 301 catagcaaac gattaatcac agaactcata tcataatata ggttctttaa 351 ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa 401 tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa 451 atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga 501 cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga 551 aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca 601 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| OV049904.1 | nt | Oryza rufipogon genome assembly, or... | 134538 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049905.1 | nt | Oryza rufipogon genome assembly, or... | 134537 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049906.1 | nt | Oryza rufipogon genome assembly, or... | 134495 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049907.1 | nt | Oryza rufipogon genome assembly, or... | 134480 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049908.1 | nt | Oryza rufipogon genome assembly, or... | 134502 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049910.1 | nt | Oryza rufipogon genome assembly, or... | 134549 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049911.1 | nt | Oryza barthii genome assembly, orga... | 134598 bp | Oryza barthii | QL-PLN-00-007 | 615 bp | View |
| OV049912.1 | nt | Oryza rufipogon genome assembly, or... | 134639 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049915.1 | nt | Oryza rufipogon genome assembly, or... | 134535 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049916.1 | nt | Oryza rufipogon genome assembly, or... | 134583 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049918.1 | nt | Oryza rufipogon genome assembly, or... | 134509 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049920.1 | nt | Oryza rufipogon genome assembly, or... | 134541 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049921.1 | nt | Oryza rufipogon genome assembly, or... | 134494 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049922.1 | nt | Oryza rufipogon genome assembly, or... | 134582 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049923.1 | nt | Oryza rufipogon genome assembly, or... | 134481 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049929.1 | nt | Oryza barthii strain W0652 genome a... | 134656 bp | Oryza barthii | QL-PLN-00-007 | 615 bp | View |
| OV049930.1 | nt | Oryza rufipogon genome assembly, or... | 134536 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049932.1 | nt | Oryza rufipogon genome assembly, or... | 134537 bp | Oryza rufipogon | QL-PLN-00-007 | 615 bp | View |
| OV049933.1 | nt | Oryza barthii strain W1050 genome a... | 134579 bp | Oryza barthii | QL-PLN-00-007 | 615 bp | View |
| OV049934.1 | nt | Oryza barthii strain W1063 genome a... | 134596 bp | Oryza barthii | QL-PLN-00-007 | 615 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.