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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG998283.1 nt Oryza sativa genome assembly, organ... 134504 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998284.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998287.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998289.1 nt Oryza sativa genome assembly, organ... 134470 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998292.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998293.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998301.1 nt Oryza sativa genome assembly, organ... 134501 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998302.1 nt Oryza sativa genome assembly, organ... 134505 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998305.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998307.1 nt Oryza sativa genome assembly, organ... 134470 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998312.1 nt Oryza sativa genome assembly, organ... 134504 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998315.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998319.1 nt Oryza sativa genome assembly, organ... 134497 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998329.1 nt Oryza sativa genome assembly, organ... 134415 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998332.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998336.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998338.1 nt Oryza sativa genome assembly, organ... 134558 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998348.1 nt Oryza sativa genome assembly, organ... 134552 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998350.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.