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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG998043.1 nt Oryza sativa genome assembly, organ... 134516 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998126.1 nt Oryza sativa genome assembly, organ... 134536 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998128.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998130.1 nt Oryza sativa genome assembly, organ... 134529 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998132.1 nt Oryza sativa genome assembly, organ... 134574 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998133.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998138.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998139.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998140.1 nt Oryza sativa genome assembly, organ... 134541 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998141.1 nt Oryza sativa genome assembly, organ... 134536 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998143.1 nt Oryza sativa genome assembly, organ... 134541 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998195.1 nt Oryza sativa genome assembly, organ... 134493 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998196.1 nt Oryza sativa genome assembly, organ... 134558 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998202.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998203.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998208.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998209.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998210.1 nt Oryza sativa genome assembly, organ... 134537 bp Oryza sativa QL-PLN-00-007 615 bp View
HG998211.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.