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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG997708.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997713.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997717.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997724.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997727.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997733.1 nt Oryza sativa genome assembly, organ... 134549 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997738.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997740.1 nt Oryza sativa genome assembly, organ... 134532 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997742.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997747.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997751.1 nt Oryza sativa genome assembly, organ... 134487 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997763.1 nt Oryza sativa genome assembly, organ... 134586 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997764.1 nt Oryza sativa genome assembly, organ... 134577 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997770.1 nt Oryza sativa genome assembly, organ... 134534 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997773.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997780.1 nt Oryza sativa genome assembly, organ... 134550 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997782.1 nt Oryza sativa genome assembly, organ... 134555 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997783.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997786.1 nt Oryza sativa genome assembly, organ... 134421 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.