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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG997647.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997649.1 nt Oryza sativa genome assembly, organ... 134495 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997653.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997659.1 nt Oryza sativa genome assembly, organ... 134504 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997660.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997662.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997664.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997667.1 nt Oryza sativa genome assembly, organ... 134539 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997670.1 nt Oryza sativa genome assembly, organ... 134497 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997671.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997674.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997678.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997683.1 nt Oryza sativa genome assembly, organ... 134553 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997686.1 nt Oryza sativa genome assembly, organ... 134496 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997690.1 nt Oryza sativa genome assembly, organ... 134537 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997700.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997701.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997702.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG997704.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.