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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 615 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggcaacttc caaattcaga gaaaccctgg aattaaaaaa
101   ggggcaatcc tgagccaaat ccatgttttg agaaaacaag cggttctcga
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa
251   attagggaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg
301   catagcaaac gattaatcac agaactcata tcataatata ggttctttaa
351   ttctttttta aaatgaaaat aggaatgatt atgaaataga aaattcataa
401   tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa
451   atccttcaat tcatagtttt cgaaatcttt ttaaaagcgg attaatcgga
501   cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga
551   aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca
601   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HG996755.1 nt Oryza sativa genome assembly, organ... 134530 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996756.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996758.1 nt Oryza sativa genome assembly, organ... 134535 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996760.1 nt Oryza sativa genome assembly, organ... 134534 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996762.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996775.1 nt Oryza sativa genome assembly, organ... 134590 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996779.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996780.1 nt Oryza sativa genome assembly, organ... 134549 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996786.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996788.1 nt Oryza sativa genome assembly, organ... 134421 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996789.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996791.1 nt Oryza sativa genome assembly, organ... 134503 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996792.1 nt Oryza sativa genome assembly, organ... 134502 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996794.1 nt Oryza sativa genome assembly, organ... 134557 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996795.1 nt Oryza sativa genome assembly, organ... 134495 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996796.1 nt Oryza sativa genome assembly, organ... 134536 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996797.1 nt Oryza sativa genome assembly, organ... 134533 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996798.1 nt Oryza sativa genome assembly, organ... 134501 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996800.1 nt Oryza sativa genome assembly, organ... 134556 bp Oryza sativa QL-PLN-00-007 615 bp View
HG996754.1 nt Oryza sativa genome assembly, organ... 134551 bp Oryza sativa QL-PLN-00-007 615 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.