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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 117 bp 
1     gcatgacgtt atttatgaga tgggtttttt gattagagtc ccgcaattat
51    acatttaata cgcgatagaa aacaaaatat agcgcgcaaa ctaggataaa
101   ttatcgcgcg cggtgtc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY944582.1 nt Cloning vector LUCTRAP-2, complete ... 6145 bp Cloning vector LUCTRAP-2 QL-ELE-00-009 117 bp View
AY968054.1 nt Cloning vector LUCTRAP-3(GW), compl... 7272 bp Cloning vector LUCTRAP-3(GW) QL-ELE-00-009 117 bp View
DQ073044.1 nt Cloning vector LUCTRAP, complete se... 5990 bp Cloning vector LUCTRAP QL-ELE-00-009 117 bp View
EU048864.1 nt Cloning vector pGreenII 0029, T-DNA... 2215 bp Cloning vector pGreenII 0029 QL-ELE-00-009 117 bp View
EU048865.1 nt Cloning vector pGreenII 0029 62-SK,... 2247 bp Cloning vector pGreenII 0029 62-SK QL-ELE-00-009 117 bp View
EU048867.1 nt Cloning vector pGreenII 0229, T-DNA... 1959 bp Cloning vector pGreenII 0229 QL-ELE-00-009 117 bp View
EU048869.1 nt Cloning vector pGreenII 0229 62-SK,... 1991 bp Cloning vector pGreenII 0229 62-SK QL-ELE-00-009 117 bp View
FM177582.1 nt Cloning vector pDEX00 10124 bp Cloning vector pDEX00 QL-ELE-00-009 117 bp View
FM177583.1 nt Cloning vector pG001 7306 bp Cloning vector pG001 QL-ELE-00-009 117 bp View
FM177584.1 nt Cloning vector pG002 7795 bp Cloning vector pG002 QL-ELE-00-009 117 bp View
FM177585.1 nt Cloning vector pG004 6883 bp Cloning vector pG004 QL-ELE-00-009 117 bp View
FN398077.1 nt Cloning vector pG003 6882 bp Cloning vector pG003 QL-ELE-00-009 117 bp View
HQ593862.1 nt Binary vector pSUN, complete sequence. 6263 bp Binary vector pSUN QL-ELE-00-009 117 bp View
HQ593863.1 nt Binary vector pSUNG, complete sequence. 8700 bp Binary vector pSUNG QL-ELE-00-009 117 bp View
LC636137.1 nt Binary vector pGK-YC9 DNA, complete... 11566 bp Binary vector pGK-YC9 QL-ELE-00-009 117 bp View
KJ816368.1 nt Cloning vector pYB196 T-DNA region,... 8616 bp Cloning vector pYB196 QL-ELE-00-009 117 bp View
JB160893.1 emblrelpat Sequence 7 from Patent EP2501815. 8868 bp synthetic construct QL-ELE-00-009 117 bp View
JB160894.1 emblrelpat Sequence 8 from Patent EP2501815. 12159 bp synthetic construct QL-ELE-00-009 117 bp View
JB160914.1 emblrelpat Sequence 28 from Patent EP2501815. 6155 bp synthetic construct QL-ELE-00-009 117 bp View
AY944581.1 nt Cloning vector LUCTRAP-1, complete ... 6149 bp Cloning vector LUCTRAP-1 QL-ELE-00-009 117 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.