Amplicon details

Amplicon:

576 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51    acctactaag tgagaacttc caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctgtgttcag aaaacaaggt tcggaaagcg
151   agaatcaaaa acagaaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacaaata gagttgactg cattggtagg ggaattcttt ccttctatcc
251   aaacgacaga aaggatgacc ttgtatacgt acgtatacat actgaaacat
301   caaacgatta atcacgactc gaatcagtct ttttttatat gaaaaatttc
351   agaatagaag gattgtgatt tgattccaag ttgaaggaag aatcgaatat
401   tcagagatca aatcattcat tcccgagtct aatagatctt tagaataact
451   gattaatcgg acgagaataa agatagagtc ccattctaca tgtcaataca
501   gacaacaatg aaatttatag taagaggaaa atccgtcgac tttaaaaatc
551   gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY319084.1 nt Polyalthia sp. Ridsdale DV-M1-12314... 980 bp Polyalthia sp. Ridsdale DV-M1-12314 QL-PLN-00-007 576 bp View
AY319093.1 nt Meiogyne cylindrocarpa tRNA-Leu (tr... 972 bp Meiogyne cylindrocarpa QL-PLN-00-007 576 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.