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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gcttctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51    gcctctaccg acagtggtcc caaagatgga cccccaccca cgaggaacat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU186087.1 nt Binary vector pCLEAN-G147, complete... 4953 bp Binary vector pCLEAN-G147 QL-ELE-00-001 195 bp View
EU186089.1 nt Binary vector pCLEAN-G144, complete... 4924 bp Binary vector pCLEAN-G144 QL-ELE-00-001 195 bp View
AY234330.1 nt Binary vector pLH7000, complete seq... 8911 bp Binary vector pLH7000 QL-ELE-00-001 195 bp View
EU040203.1 nt Expression vector pLIC-C-TAP, compl... 11429 bp Expression vector pLIC-C-TAP QL-ELE-00-001 195 bp View
EU186088.1 nt Binary vector pCLEAN-G146, complete... 4971 bp Binary vector pCLEAN-G146 QL-ELE-00-001 195 bp View
NRN_HD053533 nrnl1 Sequence 7 from Patent EP2202320. 2636 bp unidentified QL-ELE-00-001 195 bp View
AY234328.1 nt Binary vector pLH6000, complete seq... 9401 bp Binary vector pLH6000 QL-ELE-00-001 195 bp View
AY234329.1 nt Binary vector pLH6500, complete seq... 9393 bp Binary vector pLH6500 QL-ELE-00-001 195 bp View
AY234331.1 nt Binary vector pLH7500, complete seq... 8903 bp Binary vector pLH7500 QL-ELE-00-001 195 bp View
NRN_CS007934 nrnl1 Sequence 1 from Patent EP1502955. ... 12739 bp unidentified QL-ELE-00-001 195 bp View
AF458478.1 nt Binary vector pLH9000, complete seq... 9154 bp Binary vector pLH9000 QL-ELE-00-001 195 bp View
AY737283.1 nt C-terminal TAP T-DNA vector pYL436,... 12607 bp C-terminal TAP T-DNA vector pYL436 QL-ELE-00-001 195 bp View
AF458479.1 nt Binary vector pLH9500, complete seq... 9146 bp Binary vector pLH9500 QL-ELE-00-001 195 bp View
AF406991.1 nt Tobacco rattle virus RNA2-based VIG... 9663 bp Tobacco rattle virus RNA2-based VIGS vector pTRV2 QL-ELE-00-001 195 bp View
AY788908.1 nt N-terminal TAPa T-DNA vector pN-TAP... 12537 bp N-terminal TAPa T-DNA vector pN-TAPa QL-ELE-00-001 195 bp View
AY456904.1 nt Binary vector pRE1, complete sequence. 9769 bp Binary vector pRE1 QL-ELE-00-001 195 bp View
AJ551314.1 nt Transfection vector pBTdest 4462 bp Transfection vector pBTdest QL-ELE-00-001 195 bp View
AY234327.1 nt Binary vector pLH5000, complete seq... 8958 bp Binary vector pLH5000 QL-ELE-00-001 195 bp View
AJ616346.1 nt Nicotiana tabacum chloroplast kr1 D... 1431 bp Nicotiana tabacum QL-ELE-00-001 195 bp View
EU186090.1 nt Binary vector pCLEAN-G129, complete... 4270 bp Binary vector pCLEAN-G129 QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.