Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MF375491.1 nt Ti plasmid binary vector pGSh16.101... 17356 bp Ti plasmid binary vector pGSh16.1010 QL-ELE-00-004 123 bp View
MF479729.1 nt Ti plasmid binary vector pGSh16.101... 16639 bp Ti plasmid binary vector pGSh16.1012 QL-ELE-00-004 123 bp View
MF944257.1 nt Ti plasmid binary vector pGSh16.052... 10439 bp Ti plasmid binary vector pGSh16.0520 QL-ELE-00-004 123 bp View
LC375949.1 nt Binary vector pMpGWB337tdTN DNA, co... 19474 bp Binary vector pMpGWB337tdTN QL-ELE-00-004 123 bp View
LC375950.1 nt Binary vector pMpGWB337Cit DNA, com... 18729 bp Binary vector pMpGWB337Cit QL-ELE-00-004 123 bp View
LC375951.1 nt Binary vector pMpGWB337tdT DNA, com... 19485 bp Binary vector pMpGWB337tdT QL-ELE-00-004 123 bp View
LC375952.1 nt Binary vector pMpGWB337TR DNA, comp... 18712 bp Binary vector pMpGWB337TR QL-ELE-00-004 123 bp View
LC375953.1 nt Binary vector pMpGWB337mT DNA, comp... 18735 bp Binary vector pMpGWB337mT QL-ELE-00-004 123 bp View
MG760357.1 nt Cloning vector pVIR-Nick, complete ... 19084 bp Cloning vector pVIR-Nick QL-ELE-00-004 123 bp View
DI166361.1 emblrelpat Stress Resistant Plants. 13326 bp unidentified QL-ELE-00-004 123 bp View
MG687276.1 nt Cloning vector GAANTRY B donor sul1... 8026 bp Cloning vector GAANTRY B donor sul1 QL-ELE-00-004 123 bp View
MG687283.1 nt Cloning vector GAANTRY B donor tdTo... 8923 bp Cloning vector GAANTRY B donor tdTom QL-ELE-00-004 123 bp View
MP135815.1 emblrelpat Sequence 9 from Patent EP3462844. 631 bp synthetic construct QL-ELE-00-004 123 bp View
DI166467.1 emblrelpat Stress Resistant Plants. 12348 bp unidentified QL-ELE-00-004 123 bp View
MH200604.1 nt Binary vector pLX-TuMV, complete se... 14423 bp Binary vector pLX-TuMV QL-ELE-00-004 123 bp View
MH200606.1 nt Binary vector pLX-CaMV, complete se... 12857 bp Binary vector pLX-CaMV QL-ELE-00-004 123 bp View
DI166494.1 emblrelpat Stress Resistant Plants. 12393 bp unidentified QL-ELE-00-004 123 bp View
AP018599.1 nt Gateway vector R4pMpGWB201 DNA, com... 10743 bp Gateway vector R4pMpGWB201 QL-ELE-00-004 123 bp View
AP018600.1 nt Gateway vector R4pMpGWB204 DNA, com... 12549 bp Gateway vector R4pMpGWB204 QL-ELE-00-004 123 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.