Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN654719.1 nt Binary vector pCLEAN-G156, complete... 7171 bp Binary vector pCLEAN-G156 QL-ELE-00-004 123 bp View
JN654719.1 nt Binary vector pCLEAN-G156, complete... 7171 bp Binary vector pCLEAN-G156 QL-ELE-00-004 123 bp View
JN811690.1 nt Plant transformation vector pCITCAM... 9297 bp Plant transformation vector pCITCAM101 QL-ELE-00-004 123 bp View
JQ280535.1 nt Cloning vector pBGEN02-hpt, complet... 9621 bp Cloning vector pBGEN02-hpt QL-ELE-00-004 123 bp View
JQ280536.1 nt Cloning vector pBGEN02-ALSdm, compl... 10549 bp Cloning vector pBGEN02-ALSdm QL-ELE-00-004 123 bp View
MB444122.1 emblrelpat JP 2018104722-A/3: MICROBIAL OILS W... 2615 bp Saccharomyces cerevisiae QL-ELE-00-004 123 bp View
JX025642.1 nt Binary cloning vector pMAA-Red, com... 9713 bp Binary cloning vector pMAA-Red QL-ELE-00-004 123 bp View
MN832866.1 nt Binary vector pCXSN, complete sequence. 13759 bp Binary vector pCXSN QL-ELE-00-004 123 bp View
MT165900.1 nt Synthetic construct hygromycin B re... 39194 bp synthetic construct QL-ELE-00-004 123 bp View
JB089300.1 emblrelpat Sequence 9 from Patent EP2503872. 3746 bp synthetic construct QL-ELE-00-004 123 bp View
LC577760.1 nt Synthetic construct 2020KI-pPZPVX-C... 11775 bp synthetic construct QL-ELE-00-004 123 bp View
LC577761.1 nt Synthetic construct 2020KI-pPZPVX-A... 12950 bp synthetic construct QL-ELE-00-004 123 bp View
JQ974028.1 nt Plant transformation vector pAKE1::... 10699 bp Plant transformation vector pAKE1::35S BpMADS4 QL-ELE-00-004 123 bp View
JX139718.1 nt Zea mays transgenic strain MON810 G... 856 bp Zea mays QL-ELE-00-004 123 bp View
JX139719.1 nt Oryza sativa transgenic GM cassette... 985 bp Oryza sativa QL-ELE-00-004 123 bp View
JX139720.1 nt Brassica napus transgenic strain T4... 551 bp Brassica napus QL-ELE-00-004 123 bp View
JX139722.1 nt Glycine max transgenic strain A2704... 493 bp Glycine max QL-ELE-00-004 123 bp View
AB752375.1 nt Gateway binary vector pGWB480omega ... 12333 bp Gateway binary vector pGWB480omega QL-ELE-00-004 123 bp View
AB752376.1 nt Gateway binary vector pGWB580omega ... 12650 bp Gateway binary vector pGWB580omega QL-ELE-00-004 123 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.