Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
GU734656.1 nt Plant transformation vector pSITEII... 5932 bp Plant transformation vector pSITEII-5C1 QL-ELE-00-004 123 bp View
GU734657.1 nt Plant transformation vector pSITEII... 5994 bp Plant transformation vector pSITEII-6C1 QL-ELE-00-004 123 bp View
GU734658.1 nt Plant transformation vector pSITEII... 5964 bp Plant transformation vector pSITEII-7C1 QL-ELE-00-004 123 bp View
GU734659.1 nt Plant transformation vector pSITEII... 5950 bp Plant transformation vector pSITEII-8C1 QL-ELE-00-004 123 bp View
GU947643.1 nt Binary vector pBrachyTAG-G218, comp... 9009 bp Binary vector pBrachyTAG-G218 QL-ELE-00-004 123 bp View
GU947644.1 nt Binary vector pBrachyTAG-G217, comp... 6855 bp Binary vector pBrachyTAG-G217 QL-ELE-00-004 123 bp View
JX139722.1 emblreltgn Glycine max transgenic strain A2704... 493 bp Glycine max QL-ELE-00-004 123 bp View
HM439359.1 nt Plant binary vector pXNS1pat-Strep,... 5316 bp Plant binary vector pXNS1pat-Strep QL-ELE-00-004 123 bp View
HM439360.1 nt Plant binary vector pXNS2pat-Strep,... 5316 bp Plant binary vector pXNS2pat-Strep QL-ELE-00-004 123 bp View
HM439361.1 nt Plant binary vector pXS1pat-Strep, ... 5268 bp Plant binary vector pXS1pat-Strep QL-ELE-00-004 123 bp View
HM439362.1 nt Plant binary vector pXS2pat-Strep, ... 5267 bp Plant binary vector pXS2pat-Strep QL-ELE-00-004 123 bp View
GU583854.1 nt Gossypium hirsutum transgenic culti... 2471 bp Gossypium hirsutum QL-ELE-00-004 123 bp View
GU583855.1 nt Gossypium hirsutum transgenic culti... 2382 bp Gossypium hirsutum QL-ELE-00-004 123 bp View
HM066935.1 nt Nicotiana tabacum transgenic chloro... 17958 bp Nicotiana tabacum QL-ELE-00-004 123 bp View
HM989367.1 nt Expression vector pAttR-YFP-2xHA, c... 6572 bp Expression vector pAttR-YFP-2xHA QL-ELE-00-004 123 bp View
HM480107.1 nt Binary vector pHZPRi-Hyg, complete ... 13972 bp Binary vector pHZPRi-Hyg QL-ELE-00-004 123 bp View
FR695418.1 nt Binary vector pAMARENA 7766 bp Binary vector pAMARENA QL-ELE-00-004 123 bp View
AB608269.1 nt Gateway binary vector pGWB702omega ... 12156 bp Gateway binary vector pGWB702omega QL-ELE-00-004 123 bp View
JX841315.1 nt Binary vector pCamE, complete sequence. 10131 bp Binary vector pCamE QL-ELE-00-004 123 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.