Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ905214.1 nt Binary vector pCXSN, complete sequence. 10802 bp Binary vector pCXSN QL-ELE-00-004 123 bp View
FJ905216.1 nt Binary vector pCXSN-FLAG, complete ... 10829 bp Binary vector pCXSN-FLAG QL-ELE-00-004 123 bp View
FJ905218.1 nt Binary vector pCXSN-HA, complete se... 10832 bp Binary vector pCXSN-HA QL-ELE-00-004 123 bp View
FJ905220.1 nt Binary vector pCXSN-Myc, complete s... 10835 bp Binary vector pCXSN-Myc QL-ELE-00-004 123 bp View
FJ905223.1 nt Binary vector pCX-DR, complete sequ... 11229 bp Binary vector pCX-DR QL-ELE-00-004 123 bp View
FJ949107.1 nt Binary vector pVec8-GFP, complete s... 14559 bp Binary vector pVec8-GFP QL-ELE-00-004 123 bp View
FN398077.1 nt Cloning vector pG003 6882 bp Cloning vector pG003 QL-ELE-00-004 123 bp View
FN398078.1 nt Cloning vector pG005 11957 bp Cloning vector pG005 QL-ELE-00-004 123 bp View
FN398079.1 nt Cloning vector pG006 11780 bp Cloning vector pG006 QL-ELE-00-004 123 bp View
GQ463722.1 nt Physcomitrella transformation vecto... 6787 bp Physcomitrella transformation vector pBS108-35SNPT-b QL-ELE-00-004 123 bp View
GQ497217.1 nt Glycine max transgenic GMO cassette... 3210 bp Glycine max QL-ELE-00-004 123 bp View
OP757697.1 nt Cloning vector TRV-RNA2-PDS1-s18a27... 11551 bp Cloning vector TRV-RNA2-PDS1-s18a27 QL-ELE-00-004 123 bp View
AB543112.1 nt Gateway binary vector pGWB602omega ... 11534 bp Gateway binary vector pGWB602omega QL-ELE-00-004 123 bp View
GU734648.1 nt Plant transformation vector pSITE B... 5800 bp Plant transformation vector pSITE BiFC nEYFP-N1 QL-ELE-00-004 123 bp View
GU734649.1 nt Plant transformation vector pSITE B... 5473 bp Plant transformation vector pSITE BiFC cEYFP-N1 QL-ELE-00-004 123 bp View
GU734650.1 nt Plant transformation vector pSITEII... 5979 bp Plant transformation vector pSITEII-7N1 QL-ELE-00-004 123 bp View
GU734651.1 nt Plant transformation vector pSITE B... 5791 bp Plant transformation vector pSITE BiFC nEYFP-C1 QL-ELE-00-004 123 bp View
GU734652.1 nt Plant transformation vector pSITE B... 5470 bp Plant transformation vector pSITE BiFC cEFYP C1 QL-ELE-00-004 123 bp View
GU734653.1 nt Plant transformation vector pSITEII... 5974 bp Plant transformation vector pSITEII-1C1 QL-ELE-00-004 123 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.