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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 123 bp 
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY995137.1 nt Cloning vector pBS 35S YFP-attR, co... 6565 bp Cloning vector pBS 35S YFP-attR QL-ELE-00-004 123 bp View
AY995138.1 nt Cloning vector pBS 35S hRluc-attR, ... 6781 bp Cloning vector pBS 35S hRluc-attR QL-ELE-00-004 123 bp View
AY995139.1 nt Cloning vector pBS 35S attR-Rluc, c... 6716 bp Cloning vector pBS 35S attR-Rluc QL-ELE-00-004 123 bp View
AY995140.1 nt Cloning vector pBS 35S attR-hRluc, ... 6716 bp Cloning vector pBS 35S attR-hRluc QL-ELE-00-004 123 bp View
AY995141.1 nt Cloning vector pBS 35S attR-YFP, co... 6500 bp Cloning vector pBS 35S attR-YFP QL-ELE-00-004 123 bp View
AY995142.1 nt Binary vector pPZP 35S hRluc-attR, ... 12483 bp Binary vector pPZP 35S hRluc-attR QL-ELE-00-004 123 bp View
AY995143.1 nt Binary vector pPZP 35S attR-hRluc, ... 12416 bp Binary vector pPZP 35S attR-hRluc QL-ELE-00-004 123 bp View
AY995144.1 nt Binary vector pBin19 35S YFP-attR, ... 16662 bp Binary vector pBin19 35S YFP-attR QL-ELE-00-004 123 bp View
AY995145.1 nt Binary vector pBin19 35S attR-YFP, ... 16537 bp Binary vector pBin19 35S attR-YFP QL-ELE-00-004 123 bp View
KJ608133.1 nt Oryza sativa transgenic line Keming... 462 bp Oryza sativa QL-ELE-00-004 123 bp View
DQ062658.1 nt Cloning vector p713-1160, complete ... 15595 bp Cloning vector p713-1160 QL-ELE-00-004 123 bp View
V00141.1 nt Cauliflower mosaic virus genome. 8024 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
KJ608135.1 nt Zea mays transgenic line MON810 pro... 307 bp Zea mays QL-ELE-00-004 123 bp View
KJ608138.1 nt Gossypium hirsutum transgenic line ... 610 bp Gossypium hirsutum QL-ELE-00-004 123 bp View
AF458478.1 nt Binary vector pLH9000, complete seq... 9154 bp Binary vector pLH9000 QL-ELE-00-004 123 bp View
AF458479.1 nt Binary vector pLH9500, complete seq... 9146 bp Binary vector pLH9500 QL-ELE-00-004 123 bp View
AF408413.1 nt Binary vector pJawohl8-RNAi, comple... 9019 bp Binary vector pJawohl8-RNAi QL-ELE-00-004 123 bp View
KJ608143.1 nt Zea mays 35S1 transgenic line Bt11 ... 502 bp Zea mays QL-ELE-00-004 123 bp View
AY225217.1 nt Cloning vector pPLEX-5001, complete... 12966 bp Cloning vector pPLEX-5001 QL-ELE-00-004 123 bp View
AY225218.1 nt Cloning vector pPLEX-5003, complete... 12977 bp Cloning vector pPLEX-5003 QL-ELE-00-004 123 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.