Amplicon details

Amplicon:

123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ905210.1 nt Transient expression vector pX-DG, ... 5235 bp Transient expression vector pX-DG QL-ELE-00-004 123 bp View
FJ905222.1 nt Binary vector pCX-DG, complete sequ... 11277 bp Binary vector pCX-DG QL-ELE-00-004 123 bp View
GU734654.1 nt Plant transformation vector pSITEII... 5998 bp Plant transformation vector pSITEII-2C1 QL-ELE-00-004 123 bp View
GU583853.1 nt Gossypium hirsutum transgenic culti... 4074 bp Gossypium hirsutum QL-ELE-00-004 123 bp View
HQ676613.1 nt Binary vector pBrachyTAG-G210, comp... 5848 bp Binary vector pBrachyTAG-G210 QL-ELE-00-004 123 bp View
JN400385.1 nt Expression vector pMON100407, compl... 9837 bp Expression vector pMON100407 QL-ELE-00-004 123 bp View
JX475905.1 nt DU.GUS homologous recombination rep... 6396 bp DU.GUS homologous recombination reporter construct T-DNA QL-ELE-00-004 123 bp View
HG968919.1 nt Arabidopsis thaliana T-DNA flanking... 936 bp Arabidopsis thaliana QL-ELE-00-004 123 bp View
HG968567.1 nt Arabidopsis thaliana T-DNA flanking... 727 bp Arabidopsis thaliana QL-ELE-00-004 123 bp View
MF521566.1 nt Petunia x hybrida transgenic dihydr... 3304 bp Petunia x hybrida QL-ELE-00-004 123 bp View
MK791524.1 nt Binary cloning vector pRGEB32Bar-Ca... 15357 bp Binary cloning vector pRGEB32Bar-Cas9 QL-ELE-00-004 123 bp View
MN728545.1 nt Cloning vector 3XFlag-SMXL6, comple... 7307 bp Cloning vector 3XFlag-SMXL6 QL-ELE-00-004 123 bp View
AY592954.1 emblreltgn Glycine max transgenic chloroplast ... 707 bp Glycine max QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.