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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 123 bp 
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-004 123 bp View
AJ315956.1 nt Binary Cloning vector pAC161 10828 bp Binary cloning vector pAC161 QL-ELE-00-004 123 bp View
AJ537513.1 nt Synthetic construct plasmid pAC106 10877 bp synthetic construct QL-ELE-00-004 123 bp View
AJ551314.1 nt Transfection vector pBTdest 4462 bp Transfection vector pBTdest QL-ELE-00-004 123 bp View
AY488510.1 nt Gene trapping vector pEU334AN, comp... 21188 bp Gene trapping vector pEU334AN QL-ELE-00-004 123 bp View
AY488511.1 nt Gene trapping vector pEU334bn, comp... 21188 bp Gene trapping vector pEU334bn QL-ELE-00-004 123 bp View
AY737283.1 nt C-terminal TAP T-DNA vector pYL436,... 12607 bp C-terminal TAP T-DNA vector pYL436 QL-ELE-00-004 123 bp View
AY788908.1 nt N-terminal TAPa T-DNA vector pN-TAP... 12537 bp N-terminal TAPa T-DNA vector pN-TAPa QL-ELE-00-004 123 bp View
AY836546.1 nt T-DNA vector pDs-Lox, complete sequ... 9882 bp T-DNA vector pDs-Lox QL-ELE-00-004 123 bp View
DQ225746.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NA QL-ELE-00-004 123 bp View
DQ225746.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NA QL-ELE-00-004 123 bp View
DQ225747.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NB QL-ELE-00-004 123 bp View
DQ225748.1 nt Gene trapping Ds/T-DNA vector pNU39... 19278 bp Gene trapping Ds/T-DNA vector pNU393A1 QL-ELE-00-004 123 bp View
DQ225748.1 nt Gene trapping Ds/T-DNA vector pNU39... 19278 bp Gene trapping Ds/T-DNA vector pNU393A1 QL-ELE-00-004 123 bp View
DQ225749.1 nt Gene trapping Ds/T-DNA vector pNU39... 19277 bp Gene trapping Ds/T-DNA vector pNU393B2 QL-ELE-00-004 123 bp View
DQ225749.1 nt Gene trapping Ds/T-DNA vector pNU39... 19277 bp Gene trapping Ds/T-DNA vector pNU393B2 QL-ELE-00-004 123 bp View
DQ225750.1 nt Gene trapping Ds/T-DNA vector pNU43... 22204 bp Gene trapping Ds/T-DNA vector pNU435 QL-ELE-00-004 123 bp View
DQ225750.1 nt Gene trapping Ds/T-DNA vector pNU43... 22204 bp Gene trapping Ds/T-DNA vector pNU435 QL-ELE-00-004 123 bp View
AY183361.1 nt Synthetic construct duplicated CaMV... 735 bp synthetic construct QL-ELE-00-004 123 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QL-ELE-00-004 123 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.