Amplicon details

Amplicon:

592 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct taatatggaa
51    acctactaag tgataacttt caaattcagg gaaaccctgg aataaaaaat
101   gggcaatcct gagccaaatc ctgttttccg aaaacaacca agggttcaga
151   aaacgataat aaaaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacaaaaaca aatggagttg actatgttgc gttgttaaag gaatccttcc
251   atcaaaactc cagaaccaga aaggatgaag gataaaccta tatacatagg
301   tactgaaata ttatatcaaa tgattaatga cggctcgaat ctgtattttt
351   tgatatgaaa aatgaaagaa ttgttgtaaa tcgattccaa gttgaagaaa
401   gaaaagaatc gaatattcat tgatcaaatc attcactcca tagtccgata
451   gatcttttga agaactgatt aatcggacga gaataaagat agagtcccat
501   tctacatgtc aataccgaca acaatgaaat ttatagtaag aggaaaatcc
551   gtcgacttta aaaatcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AB234994.1 nt Ampelopsis cantoniensis chloroplast... 1005 bp Nekemias cantoniensis QL-PLN-00-007 592 bp View
AB234995.1 nt Ampelopsis cantoniensis chloroplast... 1010 bp Nekemias cantoniensis QL-PLN-00-007 592 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.