Amplicon details

Amplicon:

522 bp
1     cgaaatcggt agacgctacg gacttaatag aattgagcct tggtatggaa
51    acttactaag tgatagcttc caaatacagg ggaaccctgg aatattttga
101   atgggcaatc ctgatccaaa tccgtattat aggaacaata attttatttt
151   ctagaaaagg gataggtgca gagactcaac ggaagatatt ctaacgactt
201   aatatcattt gaatttgaac caatattcta tctacagagt gtagtatgtt
251   attgaaaact ttgaaagtgt tctgtatcat cgttaaaact tgtttcaacg
301   attagaactt gagttgttct aggcttgcct agcttaatga atacttaatt
351   aaagtaattc aattaagaaa taaatataat ttattccatt ttttaattat
401   tggacgagga taaagataga gtccaattct acatgtaaat gccaacaaca
451   acaatgcaaa ttgcagtagt cggaaaatcc gttggtttta taaaccgtga
501   gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF327598.1 nt Taxus baccata tRNA-Leu (trnL) gene,... 522 bp Taxus baccata QL-PLN-00-007 522 bp View
EF660635.1 nt Taxus baccata voucher 0000381 tRNA-... 899 bp Taxus baccata QL-PLN-00-007 522 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.