Amplicon details |
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Amplicon: |
562 bp | |
1 cgaaatcggt agacgctacg gacttgatcg aattgagcct tggtatggaa 51 acctaccaag tgatagcttc caaatccagg gaaccctggg atattttgaa 101 tgggtaatcc tgagccaaat ccggttcatg gagacaatag tttcttcttt 151 tattctccta agataggaag gggataggtg cagagactca atggaagcta 201 ttctaacgaa tgaatctcat ttggtccaat actgtattta tagaacgctc 251 tatttacacc taaaaagtgg gaatgtgata taacatcaga caaaactcgc 301 gatcagaact tgaatcgttc caagcatcta ttcgtaagat agatgccaga 351 ttcgagttga agtactgatt ttacattaag taatccaatt atgaatttct 401 ctactttaga tagagaattg aatcagtttt tggaataaat ggttggacga 451 gaataaagat agagtccaat tctacgtgtc aatgtcaaca acaatgcaaa 501 ttgcagtagg aggaaaatcc gttggcttta tagaccgtga gggttcaagt 551 ccctctatcc cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AF327585.1 | nt | Picea abies tRNA-Leu (trnL) gene, i... | 562 bp | Picea abies | QL-PLN-00-007 | 562 bp | View |
| EF440530.1 | nt | Picea abies from Romania tRNA-Thr (... | 1434 bp | Picea abies | QL-PLN-00-007 | 562 bp | View |
| EF440531.1 | nt | Picea abies from Poland tRNA-Thr (t... | 1434 bp | Picea abies | QL-PLN-00-007 | 562 bp | View |
| EF440533.1 | nt | Picea asperata from China tRNA-Thr ... | 1434 bp | Picea asperata | QL-PLN-00-007 | 562 bp | View |
| EF440543.1 | nt | Picea glehnii from Japan tRNA-Thr (... | 1428 bp | Picea glehnii | QL-PLN-00-007 | 562 bp | View |
| EF440545.1 | nt | Picea koraiensis from China tRNA-Th... | 1434 bp | Picea koraiensis | QL-PLN-00-007 | 562 bp | View |
| EF440552.1 | nt | Picea meyeri from China tRNA-Thr (t... | 1434 bp | Picea meyeri | QL-PLN-00-007 | 562 bp | View |
| JQ007388.1 | nt | Picea environmental sample clone E2... | 563 bp | Picea environmental sample | QL-PLN-00-007 | 562 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.