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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gcacctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP672271.1 nt Vector PK2-Cas9, complete sequence. 13797 bp Vector PK2-Cas9 QL-ELE-00-001 195 bp View
OQ859100.1 nt Synthetic construct Mla7 native con... 15875 bp synthetic construct QL-ELE-00-001 195 bp View
AB543112.1 nt Gateway binary vector pGWB602omega ... 11534 bp Gateway binary vector pGWB602omega QL-ELE-00-001 195 bp View
GU564445.1 nt Binary vector pCOXS3-phiC31, comple... 12323 bp Binary vector pCOXS3-phiC31 QL-ELE-00-001 195 bp View
AF234304.1 nt Binary vector pCAMBIA-1381Xb, compl... 10646 bp Binary vector pCAMBIA-1381Xb QL-ELE-00-001 195 bp View
GU564446.1 nt Binary vector pN3-phiC31, complete ... 12743 bp Binary vector pN3-phiC31 QL-ELE-00-001 195 bp View
NRN_CS479313 nrnl1 Sequence 10 from Patent WO200613635... 3900 bp unidentified QL-ELE-00-001 195 bp View
GU947643.1 nt Binary vector pBrachyTAG-G218, comp... 9009 bp Binary vector pBrachyTAG-G218 QL-ELE-00-001 195 bp View
KR029113.1 nt Plant multiplex genome editing vect... 14743 bp Plant multiplex genome editing vector pYLCRISPR/Cas9P35s-B QL-ELE-00-001 195 bp View
GU947644.1 nt Binary vector pBrachyTAG-G217, comp... 6855 bp Binary vector pBrachyTAG-G217 QL-ELE-00-001 195 bp View
AF234306.1 nt Binary vector pCAMBIA-1381Z, comple... 11226 bp Binary vector pCAMBIA-1381Z QL-ELE-00-001 195 bp View
GQ870263.1 nt Plant RNAi vector pRNAi-LIC, comple... 12097 bp Plant RNAi vector pRNAi-LIC QL-ELE-00-001 195 bp View
AF234307.1 nt Binary vector pCAMBIA-1390, complet... 8860 bp Binary vector pCAMBIA-1390 QL-ELE-00-001 195 bp View
JB160894.1 emblrelpat Sequence 8 from Patent EP2501815. 12159 bp synthetic construct QL-ELE-00-001 195 bp View
KJ608132.1 emblreltgn Oryza sativa transgenic line Kefeng... 787 bp Oryza sativa QL-ELE-00-001 195 bp View
HM750245.1 nt Cloning vector pSIM1, complete sequ... 15584 bp Cloning vector pSIM1 QL-ELE-00-001 195 bp View
AF234308.1 nt Binary vector pCAMBIA-1391, complet... 10657 bp Binary vector pCAMBIA-1391 QL-ELE-00-001 195 bp View
HM750246.1 nt Cloning vector pSIM3, complete sequ... 15596 bp Cloning vector pSIM3 QL-ELE-00-001 195 bp View
NRN_CS565780 nrnl1 Sequence 25 from Patent WO200603246... 11811 bp unidentified QL-ELE-00-001 195 bp View
LC057445.1 nt Binary vector pMpGWB103 DNA, comple... 12945 bp Binary vector pMpGWB103 QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.