European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gcacctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY836546.1 nt T-DNA vector pDs-Lox, complete sequ... 9882 bp T-DNA vector pDs-Lox QL-ELE-00-001 195 bp View
NRN_CS437393 nrnl1 Sequence 4 from Patent WO2006105946... 4683 bp unidentified QL-ELE-00-001 195 bp View
NRN_AR362611 nrnl1 Sequence 3 from patent US 5177308. 950 bp unidentified QL-ELE-00-001 195 bp View
DQ225749.1 nt Gene trapping Ds/T-DNA vector pNU39... 19277 bp Gene trapping Ds/T-DNA vector pNU393B2 QL-ELE-00-001 195 bp View
NRN_FW366744 nrnl1 WOODY PLANTS HAVING IMPROVED GROWTH... 13599 bp unidentified QL-ELE-00-001 195 bp View
AY225219.1 nt Cloning vector pPLEX-5011, complete... 13474 bp Cloning vector pPLEX-5011 QL-ELE-00-001 195 bp View
AF354045.1 nt Binary vector pCAMBIA-1305.1, compl... 11846 bp Binary vector pCAMBIA-1305.1 QL-ELE-00-001 195 bp View
NRN_AR364108 nrnl1 Sequence 30 from patent US 5254799. 980 bp unidentified QL-ELE-00-001 195 bp View
AF354046.1 nt Binary vector pCAMBIA-1305.2, compl... 11921 bp Binary vector pCAMBIA-1305.2 QL-ELE-00-001 195 bp View
NRN_CS104338 nrnl1 Sequence 6 from Patent WO2005049842... 5345 bp unidentified QL-ELE-00-001 195 bp View
AY739897.1 nt Cloning vector pRGK335, complete se... 11051 bp Cloning vector pRGK335 QL-ELE-00-001 195 bp View
NRN_I24797 nrnl1 Sequence 30 from patent US 5545565.... 979 bp unidentified QL-ELE-00-001 195 bp View
NRN_FW335851 nrnl1 gene modification of OASA2 gene via... 19406 bp unidentified QL-ELE-00-001 195 bp View
AY739899.1 nt Cloning vector pRGK337, complete se... 11881 bp Cloning vector pRGK337 QL-ELE-00-001 195 bp View
NRN_I24798 nrnl1 Sequence 31 from patent US 5545565.... 978 bp unidentified QL-ELE-00-001 195 bp View
KJ608132.1 nt Oryza sativa transgenic line Kefeng... 787 bp Oryza sativa QL-ELE-00-001 195 bp View
NRN_CS434496 nrnl1 Sequence 14 from Patent WO200604563... 5616 bp unidentified QL-ELE-00-001 195 bp View
KJ608133.1 nt Oryza sativa transgenic line Keming... 462 bp Oryza sativa QL-ELE-00-001 195 bp View
NRN_AR893334 nrnl1 Sequence 9 from patent US 7064246. 700 bp unidentified QL-ELE-00-001 195 bp View
DI231082.1 emblrelpat KR 1020110096555-A/8: Manufacturing... 2615 bp Saccharomyces cerevisiae QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.