European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gcacctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ905222.1 nt Binary vector pCX-DG, complete sequ... 11277 bp Binary vector pCX-DG QL-ELE-00-001 195 bp View
FJ905223.1 nt Binary vector pCX-DR, complete sequ... 11229 bp Binary vector pCX-DR QL-ELE-00-001 195 bp View
FJ905224.1 nt Binary vector pCXGUS-P, complete se... 11735 bp Binary vector pCXGUS-P QL-ELE-00-001 195 bp View
FJ905225.1 nt Binary vector pCXGFP-P, complete se... 10640 bp Binary vector pCXGFP-P QL-ELE-00-001 195 bp View
FN398077.1 nt Cloning vector pG003 6882 bp Cloning vector pG003 QL-ELE-00-001 195 bp View
FN398078.1 nt Cloning vector pG005 11957 bp Cloning vector pG005 QL-ELE-00-001 195 bp View
FN398079.1 nt Cloning vector pG006 11780 bp Cloning vector pG006 QL-ELE-00-001 195 bp View
OP672271.1 nt Vector PK2-Cas9, complete sequence. 13797 bp Vector PK2-Cas9 QL-ELE-00-001 195 bp View
OQ859100.1 nt Synthetic construct Mla7 native con... 15875 bp synthetic construct QL-ELE-00-001 195 bp View
AB543112.1 nt Gateway binary vector pGWB602omega ... 11534 bp Gateway binary vector pGWB602omega QL-ELE-00-001 195 bp View
GU564445.1 nt Binary vector pCOXS3-phiC31, comple... 12323 bp Binary vector pCOXS3-phiC31 QL-ELE-00-001 195 bp View
GU564446.1 nt Binary vector pN3-phiC31, complete ... 12743 bp Binary vector pN3-phiC31 QL-ELE-00-001 195 bp View
GU947643.1 nt Binary vector pBrachyTAG-G218, comp... 9009 bp Binary vector pBrachyTAG-G218 QL-ELE-00-001 195 bp View
GU947644.1 nt Binary vector pBrachyTAG-G217, comp... 6855 bp Binary vector pBrachyTAG-G217 QL-ELE-00-001 195 bp View
GQ870263.1 nt Plant RNAi vector pRNAi-LIC, comple... 12097 bp Plant RNAi vector pRNAi-LIC QL-ELE-00-001 195 bp View
KJ608132.1 emblreltgn Oryza sativa transgenic line Kefeng... 787 bp Oryza sativa QL-ELE-00-001 195 bp View
HM750245.1 nt Cloning vector pSIM1, complete sequ... 15584 bp Cloning vector pSIM1 QL-ELE-00-001 195 bp View
HM750246.1 nt Cloning vector pSIM3, complete sequ... 15596 bp Cloning vector pSIM3 QL-ELE-00-001 195 bp View
OP013022.1 nt Synthetic construct clone pEnEOimsf... 6328 bp synthetic construct QL-ELE-00-001 195 bp View
OP013023.1 nt Synthetic construct clone pEnEOimsf... 6340 bp synthetic construct QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.