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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gcacctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI962088.1 emblrelpat Sequence 9 from patent US 10053703. 8700 bp unidentified QL-ELE-00-005 195 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-005 195 bp View
D84238.1 nt Nicotiana tabacum DNA, transgene in... 12494 bp Nicotiana tabacum QL-ELE-00-005 195 bp View
HJ186399.1 emblrelpat Sequence 34 from patent US 8344208. 8905 bp unidentified QL-ELE-00-005 195 bp View
CS437394.1 emblrelpat Sequence 5 from Patent WO2006105946. 4992 bp synthetic construct QL-ELE-00-005 195 bp View
AY788908.1 nt N-terminal TAPa T-DNA vector pN-TAP... 12537 bp N-terminal TAPa T-DNA vector pN-TAPa QL-ELE-00-005 195 bp View
AY804024.1 nt Binary vector pGA643, complete sequ... 11601 bp Binary vector pGA643 QL-ELE-00-005 195 bp View
CS479313.1 emblrelpat Sequence 10 from Patent WO2006136351. 3900 bp synthetic construct QL-ELE-00-005 195 bp View
AY836546.1 nt T-DNA vector pDs-Lox, complete sequ... 9882 bp T-DNA vector pDs-Lox QL-ELE-00-005 195 bp View
KJ508866.1 nt Binary vector pIPKb027, complete se... 15551 bp Binary vector pIPKb027 QL-ELE-00-005 195 bp View
HJ186419.1 emblrelpat Sequence 54 from patent US 8344208. 728 bp unidentified QL-ELE-00-005 195 bp View
DQ225749.1 nt Gene trapping Ds/T-DNA vector pNU39... 19277 bp Gene trapping Ds/T-DNA vector pNU393B2 QL-ELE-00-005 195 bp View
DQ225751.1 nt Immobile Ac/T-DNA vector pKU352NA, ... 18090 bp Immobile Ac/T-DNA vector pKU352NA QL-ELE-00-005 195 bp View
CS479314.1 emblrelpat Sequence 11 from Patent WO2006136351. 4680 bp synthetic construct QL-ELE-00-005 195 bp View
AF354045.1 nt Binary vector pCAMBIA-1305.1, compl... 11846 bp Binary vector pCAMBIA-1305.1 QL-ELE-00-005 195 bp View
MI962089.1 emblrelpat Sequence 10 from patent US 10053703. 8751 bp unidentified QL-ELE-00-005 195 bp View
AF354046.1 nt Binary vector pCAMBIA-1305.2, compl... 11921 bp Binary vector pCAMBIA-1305.2 QL-ELE-00-005 195 bp View
CS479315.1 emblrelpat Sequence 12 from Patent WO2006136351. 5490 bp synthetic construct QL-ELE-00-005 195 bp View
AY739897.1 nt Cloning vector pRGK335, complete se... 11051 bp Cloning vector pRGK335 QL-ELE-00-005 195 bp View
AY739898.1 nt Cloning vector pRGK336, complete se... 11700 bp Cloning vector pRGK336 QL-ELE-00-005 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.