Amplicon details

Amplicon:

82 bp
1     ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
51    cgtggaaaaa gaagacgttc caaccacgtc tt 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724704.1 nt Gateway expression vector pAGRIKOLA... 9449 bp Gateway expression vector pAGRIKOLA-CATMA1a00190 QL-ELE-00-012 82 bp View
HF949907.1 nt Boechera divaricarpa GSS, clone B59... 1153 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724919.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA2a00515 QL-ELE-00-012 82 bp View
HF949938.1 nt Boechera divaricarpa GSS, clone B59... 1180 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724713.1 nt Gateway expression vector pAGRIKOLA... 9463 bp Gateway expression vector pAGRIKOLA-CATMA1a01920 QL-ELE-00-012 82 bp View
HF949970.1 nt Boechera divaricarpa GSS, clone B59... 1172 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724722.1 nt Gateway expression vector pAGRIKOLA... 9539 bp Gateway expression vector pAGRIKOLA-CATMA1a03920 QL-ELE-00-012 82 bp View
HF950136.1 nt Boechera divaricarpa GSS, clone B53... 1140 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
DQ225747.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NB QL-ELE-00-012 82 bp View
HF950138.1 nt Boechera divaricarpa GSS, clone B53... 1176 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724922.1 nt Gateway expression vector pAGRIKOLA... 9691 bp Gateway expression vector pAGRIKOLA-CATMA2a00550 QL-ELE-00-012 82 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724731.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA1a08300 QL-ELE-00-012 82 bp View
HF950332.1 nt Boechera divaricarpa GSS, clone B53... 1163 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724923.1 nt Gateway expression vector pAGRIKOLA... 9683 bp Gateway expression vector pAGRIKOLA-CATMA2a00560 QL-ELE-00-012 82 bp View
HF950532.1 nt Boechera divaricarpa GSS, clone B53... 1208 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT724924.1 nt Gateway expression vector pAGRIKOLA... 9603 bp Gateway expression vector pAGRIKOLA-CATMA2a00590 QL-ELE-00-012 82 bp View
HF951213.1 nt Boechera divaricarpa GSS, clone B62... 1125 bp Boechera divaricarpa QL-ELE-00-012 82 bp View
LT725061.1 nt Gateway expression vector pAGRIKOLA... 9679 bp Gateway expression vector pAGRIKOLA-CATMA2a13950 QL-ELE-00-012 82 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.