Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GZ594071 nrnl1 Sequence 66 from patent US 8309794. 3610 bp unidentified QL-ELE-00-001 195 bp View
LT725226.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA3a11060 QL-ELE-00-001 195 bp View
NRN_GZ594077 nrnl1 Sequence 72 from patent US 8309794. 2787 bp unidentified QL-ELE-00-001 195 bp View
LT725235.1 nt Gateway expression vector pAGRIKOLA... 9665 bp Gateway expression vector pAGRIKOLA-CATMA3a15570 QL-ELE-00-001 195 bp View
KM507042.1 nt Binary vector pDOE-01, complete seq... 12650 bp Binary vector pDOE-01 QL-ELE-00-001 195 bp View
LT725244.1 nt Gateway expression vector pAGRIKOLA... 9529 bp Gateway expression vector pAGRIKOLA-CATMA3a17970 QL-ELE-00-001 195 bp View
KM507043.1 nt Binary vector pDOE-02, complete seq... 12653 bp Binary vector pDOE-02 QL-ELE-00-001 195 bp View
LT725253.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA3a20505 QL-ELE-00-001 195 bp View
KM507044.1 nt Binary vector pDOE-03, complete seq... 12653 bp Binary vector pDOE-03 QL-ELE-00-001 195 bp View
LT725262.1 nt Gateway expression vector pAGRIKOLA... 9481 bp Gateway expression vector pAGRIKOLA-CATMA3a22995 QL-ELE-00-001 195 bp View
KM507045.1 nt Binary vector pDOE-04, complete seq... 12656 bp Binary vector pDOE-04 QL-ELE-00-001 195 bp View
LT725266.1 nt Gateway expression vector pAGRIKOLA... 9541 bp Gateway expression vector pAGRIKOLA-CATMA3a23220 QL-ELE-00-001 195 bp View
LT725271.1 nt Gateway expression vector pAGRIKOLA... 9527 bp Gateway expression vector pAGRIKOLA-CATMA3a24613 QL-ELE-00-001 195 bp View
KM507046.1 nt Binary vector pDOE-05, complete seq... 12953 bp Binary vector pDOE-05 QL-ELE-00-001 195 bp View
LT725280.1 nt Gateway expression vector pAGRIKOLA... 9441 bp Gateway expression vector pAGRIKOLA-CATMA3a30860 QL-ELE-00-001 195 bp View
KP150430.1 nt Binary vector pYBA-1352, complete s... 6366 bp Binary vector pYBA-1352 QL-ELE-00-001 195 bp View
LT725289.1 nt Gateway expression vector pAGRIKOLA... 9741 bp Gateway expression vector pAGRIKOLA-CATMA3a40630 QL-ELE-00-001 195 bp View
KP150431.1 nt Binary vector pYBA-1353, complete s... 6366 bp Binary vector pYBA-1353 QL-ELE-00-001 195 bp View
LT725298.1 nt Gateway expression vector pAGRIKOLA... 9591 bp Gateway expression vector pAGRIKOLA-CATMA3a46080 QL-ELE-00-001 195 bp View
KF876799.1 nt Binary vector pYBA-1135, complete s... 6557 bp Binary vector pYBA-1135 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.