Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HF949561.1 nt Boechera divaricarpa GSS, clone B59... 1195 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF949886.1 nt Boechera divaricarpa GSS, clone B59... 1131 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF949907.1 nt Boechera divaricarpa GSS, clone B59... 1153 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF949970.1 nt Boechera divaricarpa GSS, clone B59... 1172 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF950140.1 nt Boechera divaricarpa GSS, clone B53... 1199 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF950332.1 nt Boechera divaricarpa GSS, clone B53... 1163 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF950532.1 nt Boechera divaricarpa GSS, clone B53... 1208 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF950541.1 nt Boechera divaricarpa GSS, clone B53... 1175 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF951213.1 nt Boechera divaricarpa GSS, clone B62... 1125 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF951329.1 nt Boechera divaricarpa GSS, clone B62... 1140 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF951363.1 nt Boechera divaricarpa GSS, clone B62... 1145 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
HF951365.1 nt Boechera divaricarpa GSS, clone B62... 1162 bp Boechera divaricarpa QL-ELE-00-005 195 bp View
LT724955.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a00990 QL-ELE-00-005 195 bp View
LT724956.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01000 QL-ELE-00-005 195 bp View
LT724957.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a01010 QL-ELE-00-005 195 bp View
LT724958.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA2a01040 QL-ELE-00-005 195 bp View
JB343030.1 emblrelpat Sequence 25 from Patent EP2494051. 4104 bp synthetic construct QL-ELE-00-005 195 bp View
JB343032.1 emblrelpat Sequence 27 from Patent EP2494051. 18784 bp synthetic construct QL-ELE-00-005 195 bp View
LT724959.1 nt Gateway expression vector pAGRIKOLA... 9913 bp Gateway expression vector pAGRIKOLA-CATMA2a01050 QL-ELE-00-005 195 bp View
JB734987.1 emblrelpat Sequence 48 from Patent EP2616544. 15589 bp synthetic construct QL-ELE-00-005 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.