Amplicon details

Amplicon:

195 bp
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    ctctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT724817.1 nt Gateway expression vector pAGRIKOLA... 9555 bp Gateway expression vector pAGRIKOLA-CATMA1a41675 QL-ELE-00-001 195 bp View
EF010978.1 nt Silencing vector pFE12860S, complet... 6158 bp Silencing vector pFE12860S QL-ELE-00-001 195 bp View
LT724826.1 nt Gateway expression vector pAGRIKOLA... 9465 bp Gateway expression vector pAGRIKOLA-CATMA1a45650 QL-ELE-00-001 195 bp View
NRN_HC918586 nrnl1 Sequence 9 from Patent WO2010061186... 1331 bp unidentified QL-ELE-00-001 195 bp View
EF010979.1 nt Silencing vector pSE12860S, complet... 6268 bp Silencing vector pSE12860S QL-ELE-00-001 195 bp View
LT725154.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a38520 QL-ELE-00-001 195 bp View
LT724867.1 nt Gateway expression vector pAGRIKOLA... 9553 bp Gateway expression vector pAGRIKOLA-CATMA1a63150 QL-ELE-00-001 195 bp View
LT725163.1 nt Gateway expression vector pAGRIKOLA... 9491 bp Gateway expression vector pAGRIKOLA-CATMA2a40070 QL-ELE-00-001 195 bp View
DQ995484.1 nt Overexpression vector pFE12860OE, c... 7022 bp Overexpression vector pFE12860OE QL-ELE-00-001 195 bp View
LT725172.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA2a41570 QL-ELE-00-001 195 bp View
NRN_GZ594072 nrnl1 Sequence 67 from patent US 8309794. 4510 bp unidentified QL-ELE-00-001 195 bp View
LT725181.1 nt Gateway expression vector pAGRIKOLA... 9515 bp Gateway expression vector pAGRIKOLA-CATMA2a46160 QL-ELE-00-001 195 bp View
DQ995486.1 nt Overexpression vector pFC12850OE, c... 6925 bp Overexpression vector pFC12850OE QL-ELE-00-001 195 bp View
LT725190.1 nt Gateway expression vector pAGRIKOLA... 9485 bp Gateway expression vector pAGRIKOLA-CATMA2b45610 QL-ELE-00-001 195 bp View
NRN_CQ894857 nrnl1 Sequence 25 from Patent WO200409014... 13226 bp unidentified QL-ELE-00-001 195 bp View
LT725199.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA3a00327 QL-ELE-00-001 195 bp View
LT724920.1 nt Gateway expression vector pAGRIKOLA... 9467 bp Gateway expression vector pAGRIKOLA-CATMA2a00520 QL-ELE-00-001 195 bp View
LT725208.1 nt Gateway expression vector pAGRIKOLA... 9635 bp Gateway expression vector pAGRIKOLA-CATMA3a04150 QL-ELE-00-001 195 bp View
KU221178.1 nt Binary vector pYBA-1302, complete s... 5596 bp Binary vector pYBA-1302 QL-ELE-00-001 195 bp View
LT725499.1 nt Gateway expression vector pAGRIKOLA... 9523 bp Gateway expression vector pAGRIKOLA-CATMA5a01810 QL-ELE-00-001 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.